Factsheet for TraesCS4D01G201700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	93.7	99.49
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	93.34	98.62
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	83.35	88.73
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	83.12	87.81
Os03t0281900-01	Rice	cytosol, plasma membrane	74.32	79.42
HORVU4Hr1G058070.2	Barley	cytosol	73.72	76.07
CDY44641	Canola	plasma membrane	25.33	71.72
Bra005049.1-P	Field mustard	plasma membrane	25.21	71.38
Bra005051.1-P	Field mustard	plastid	51.25	70.2
CDX74853	Canola	plastid	51.25	69.85
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	58.5	67.96
CDX69629	Canola	plastid	57.67	66.62
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	57.55	66.58
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	57.43	66.53
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	58.15	66.44
Solyc05g054890.2.1	Tomato	cytosol	58.98	66.13
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	58.74	66.13
KRH67592	Soybean	plastid	57.67	66.08
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	56.12	65.74
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	57.31	65.49
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	58.26	65.33
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	57.07	65.22
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	56.0	65.06
PGSC0003DMT400029838	Potato	extracellular	53.63	64.89
CDY09810	Canola	plastid	57.91	64.76
AT2G39350.1	Thale cress	cytosol	56.96	64.73
Solyc04g010210.1.1	Tomato	extracellular	54.93	64.71
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	56.84	64.25
AT3G53510.1	Thale cress	plasma membrane	56.24	64.01
Solyc09g005970.1.1	Tomato	plasma membrane	55.65	63.41
PGSC0003DMT400061466	Potato	plasma membrane	55.77	63.29
CDY18451	Canola	cytosol, peroxisome, plasma membrane	55.77	63.21
CDX93388	Canola	plasma membrane	55.65	63.16
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.53	62.94
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	50.42	62.26
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	55.89	62.25
CDX73549	Canola	cytosol, peroxisome, plasma membrane	55.05	61.24
CDY02907	Canola	cytosol, peroxisome, plasma membrane	46.14	61.1
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	50.18	60.98
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	54.58	60.71
CDX76121	Canola	cytosol	33.41	59.66
CDX76119	Canola	cytosol, peroxisome, plasma membrane	46.97	59.22
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	46.61	59.21
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	48.87	58.8
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	49.23	58.47
CDX67624	Canola	cytosol, peroxisome, plasma membrane	49.11	58.42
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	48.99	58.27
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.11	58.17
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	48.75	57.91
CDY40201	Canola	cytosol	48.51	57.63
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	48.51	56.28
CDY37656	Canola	cytosol, peroxisome, plasma membrane	47.44	55.96
CDY65003	Canola	cytosol, peroxisome, plasma membrane	47.21	55.6
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.09	55.38
CDX73404	Canola	plasma membrane	48.87	52.09
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.41	49.26
CDY50899	Canola	cytosol	19.02	48.05
Bra014774.1-P	Field mustard	plasma membrane	34.96	46.45
CDY02906	Canola	plasma membrane	58.26	38.13
CDX76122	Canola	plasma membrane	58.03	38.07
Bra014776.1-P	Field mustard	cytosol	58.03	38.01
TraesCS3D01G254600.1	Wheat	cytosol, peroxisome, plasma membrane	31.51	36.75
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	24.73	34.38
GSMUA_Achr6P08820_001	Banana	plasma membrane	50.06	34.06
TraesCS5D01G211000.1	Wheat	cytosol	33.17	31.7
TraesCS1D01G240600.1	Wheat	plasma membrane	24.14	31.09
TraesCS2D01G585300.1	Wheat	plasma membrane	23.78	29.67
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	23.31	29.61
TraesCS4D01G092000.1	Wheat	plasma membrane	21.76	28.24
TraesCS7D01G375300.1	Wheat	cytosol, peroxisome, plasma membrane	21.4	27.15
TraesCS7D01G067300.1	Wheat	cytosol, nucleus, plasma membrane, plastid	22.0	26.93
TraesCS3D01G019000.1	Wheat	golgi	20.33	25.68
TraesCS4D01G271500.1	Wheat	plastid	22.83	25.53

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628	GO:GO:0009653	GO:GO:0009719
GO:GO:0009733	GO:GO:0009737	GO:GO:0009739	GO:GO:0009751	GO:GO:0009753	GO:GO:0009987
GO:GO:0010345	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0019748	GO:GO:0030312
GO:GO:0048225	GO:GO:0048226	GO:GO:0055075	GO:GO:0055078	GO:GO:0071456	GO:GO:0071470
GO:GO:0071472	GO:GO:1901002	GO:GO:1902074	GO:GO:2000032	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G201700	EnsemblPlants:TraesCS4D01G201700.1	SEG:seg

Description

No Description!

Coordinates

chr4D:+:348563682..348566207

Molecular Weight (calculated)

92266.3 Da

IEP (calculated)

8.872

GRAVY (calculated)

0.019

Length

841 amino acids

Sequence
(BLAST)

001: MVTGTMLRVQ PAPSTSLSLS PSLAAAATAR WPGPVCELDL YAGSAEPSKM SRFVDKLPFF DRRASPMEEA DDIPRSGLLH LHGGHHHYQH HHQPQTTLMA
101: PEPSPPTTKQ SSSTLAQLLK RVNEARSDAS SPNSSPSHYT IELGASMPGS TGSESDHTSL TGVGDGTLLP FVLKFTDLTY SVKQRKKGPC LPSLPFRRGD
201: AEPEAPRMKT LLDNISGEAR EGEIMAVLGA SGSGKSTLID ALANRIRKES LHGSVTLNGE SMDNNLLKVI SAYVMQDDLL YPMLTVEETL MFSAEFRLPR
301: SLPTKEKKKR VQALIDQLGL RNAANTIIGD EGHRGVSGGE RRRVSIGVDI IHDPIVLFLD EPTSGLDSTS AFMVVKVLQR IAQSGSVVVM SIHQPSYRIL
401: GLLDRLLFLS RGQTVYYGPP GSLSSFFSDF GKPIHDNENP TEFALDLVRE LETMPNGACD LVEHNKSWQK RMGPKMKHAD DGNGGKPSLS LQEAISASIS
501: RGKLVSGETD GNVTVPSPSS APASAVAKFA NPFWIEMGVL TRRAFLNTKR TPEIFVIRLG AVLITGFILA TIFWRLDDSP KGVEERLGFF AIAMSTMFYT
601: CSDALPVFLN ERYIFLRETA YNAYRRSSYV LSHTIVGFPS LIVLSLAFAV TTFFAVGLAG GAEGFFFFVA IVLASFWAGS GFATFLSGVV TNVQLGFPVV
701: VSTLAYFLLF SGFFINRDRI PKYWLWFHYA SLVKYPYEAV MINEFSDPGR CFVRGVQMFD NTPLSVLPAA IKVRVLRAMS SSLGINIGTA TCITTGPDFL
801: KQQAVTDLTK WDCLWITVAW GFLFRILFYI SLLLGSRNKR R

Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)

001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR

Arabidopsis Description

ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.