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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 63.19 56.34
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 59.08 51.59
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 55.13 48.81
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 54.5 48.8
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 54.34 48.59
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 53.4 48.35
Bra005051.1-P Field mustard plastid 42.18 43.49
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 47.55 41.46
GSMUA_Achr5P28450_001 Banana plasma membrane 44.87 40.69
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 44.55 39.94
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 46.45 39.52
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 46.13 39.35
HORVU5Hr1G021110.1 Barley cytosol 26.54 39.16
Os05t0120000-00 Rice plasma membrane 42.02 39.12
Os05t0120200-01 Rice plasma membrane 43.13 39.06
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 42.18 38.58
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 45.02 38.36
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 42.02 38.33
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 40.44 38.32
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 41.07 38.18
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 41.07 38.18
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 41.07 38.18
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 42.18 38.14
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 47.55 38.1
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 40.92 38.03
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 45.34 37.91
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 45.34 37.91
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 45.18 37.83
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 45.18 37.83
TraesCS3B01G387500.1 Wheat plastid 45.18 37.78
EES18923 Sorghum cytosol, peroxisome, plasma membrane 42.5 37.68
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 44.23 37.58
EER95064 Sorghum cytosol, peroxisome, plasma membrane 47.24 37.56
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 41.86 37.22
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 39.65 37.19
EES17614 Sorghum cytosol, peroxisome, vacuole 41.55 37.04
Zm00001d035553_P001 Maize plasma membrane 41.71 36.97
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 46.45 36.93
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 39.34 36.89
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 46.13 36.87
Zm00001d042953_P001 Maize plasma membrane 44.23 36.79
Os01t0836600-01 Rice plasma membrane 43.44 36.72
Os03t0281900-01 Rice cytosol, plasma membrane 45.02 36.21
HORVU4Hr1G058070.2 Barley cytosol 45.34 35.21
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 46.45 34.96
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 41.55 33.33
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 43.92 30.92
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 45.66 30.55
Os03t0282100-00 Rice cytosol, nucleus, plastid 35.55 29.37
Bra025152.1-P Field mustard plastid 19.59 25.05
Bra013916.1-P Field mustard plastid 22.27 24.61
Bra030948.1-P Field mustard cytosol, peroxisome, plasma membrane 22.43 24.15
Bra022614.1-P Field mustard plastid 22.27 23.94
Bra013141.1-P Field mustard cytosol, peroxisome, plasma membrane 23.85 23.89
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 24.64 23.78
Bra014776.1-P Field mustard cytosol 47.55 23.44
Bra002234.1-P Field mustard cytosol 17.38 22.92
Bra016095.1-P Field mustard cytosol, peroxisome, plasma membrane 22.75 21.79
Bra003903.1-P Field mustard cytosol, peroxisome, plasma membrane 22.27 21.69
GSMUA_Achr6P08820_001 Banana plasma membrane 42.18 21.6
Bra019051.1-P Field mustard plasma membrane 21.64 21.51
Bra007999.1-P Field mustard plasma membrane 22.27 21.4
Bra026514.1-P Field mustard cytosol, peroxisome, plasma membrane 22.27 21.11
Bra026352.1-P Field mustard cytosol, peroxisome, plasma membrane 21.01 20.85
Bra033878.1-P Field mustard cytosol, peroxisome, plastid 21.01 20.75
Bra009203.1-P Field mustard plasma membrane 24.49 20.53
Bra028729.1-P Field mustard cytosol, peroxisome, plasma membrane 24.33 20.48
Bra039378.1-P Field mustard cytosol, peroxisome, plasma membrane 21.17 19.68
Bra005049.1-P Field mustard plasma membrane 8.69 18.52
Bra023202.1-P Field mustard cytosol, peroxisome, plasma membrane 21.17 18.43
Bra014326.1-P Field mustard cytosol, peroxisome, plasma membrane 21.01 18.05
Bra033441.1-P Field mustard plastid 24.17 13.52
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra014774EnsemblPlants:Bra014774.1EnsemblPlants:Bra014774.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887InterPro:IPR003439UniProt:M4DE55InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0002544B37SEG:seg:::
Description
AT3G55130 (E=4e-175) ATWBC19 | ATWBC19 (White-Brown Complex homolog 19); ATPase, coupled to transmembrane movement of substances
Coordinates
chrA04:+:2977304..2983524
Molecular Weight (calculated)
70122.0 Da
IEP (calculated)
8.531
GRAVY (calculated)
0.095
Length
633 amino acids
Sequence
(BLAST)
001: MFSLYPSFTE MSRDEAFTGF SPVYDSRWFG LLILGSGGLL NTVFAGFSLA SHRLRRCCGR VWSRFFSGES DSLDRLRLSI FSLLKLWSNG LTHQNRCLAV
101: VIVVASCSGR FPVEADYSLR RRLLVGEGDD VSAWHVSLLH YATYTTLWVS SRLWTAEKIM RCLKIGLKNA PTDVAAGFGV IHGGSTKLVV AVRLCAPPNI
201: LWDCRQSVLR SGCFCAKPLA TLLDDVSGEA CDGDILAVLG ASGAGKSTLI DALAGRVAKE SLRGSVTLNG DNVLQSSLLK VISAYVMQDD LLFPMLTVKE
301: TLMFASEFRL PRSLSKSKKM ERVEALIDQL GLRNAADTRI GDEGHRGVSG GERRRVSIGI DIIHDPIVLF LDEPTSGLDS TNAFMVVQVL KRIAQSGSIV
401: IMSIHQPSAR ILDLLDRLII LSRGKSVFNG SPANLPSFFS DFGHPIPERE NITEFSLDLV RELEREPNEG TRELVDFNDG WQKKKFARDT TQTASQQALS
501: LKEAIDASVS RGKLVSGSSG SMETISSYAN PSLFETFILA KRYMKNWIRM PELVGTRIAT VMVTGFLLAT VYWKLDNTPK GAQERLTLFA FVVPTMFFCC
601: LDNVPVFIQE RYIFLRETAH NGYRTSFLFL ISM
Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.