Factsheet for Bra030948.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02516	Canola	cytosol, peroxisome, plasma membrane	100.0	100.0
AT1G53270.1	Thale cress	plasma membrane	92.69	92.37
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	66.16	63.46
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	64.29	61.97
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	63.78	61.37
PGSC0003DMT400032370	Potato	plasma membrane	63.61	60.32
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	63.27	59.9
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	39.12	55.56
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	44.39	51.48
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	52.38	50.91
TraesCS3B01G251300.1	Wheat	plastid	52.38	50.91
TraesCS3A01G221400.1	Wheat	plastid	52.38	50.91
HORVU3Hr1G054160.1	Barley	plastid	52.55	50.82
Os01t0615500-00	Rice	plastid	51.53	49.43
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	51.02	49.26
EES03276	Sorghum	mitochondrion	51.02	49.02
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.11	43.83
Bra013916.1-P	Field mustard	plastid	42.01	43.11
Bra002234.1-P	Field mustard	cytosol	34.01	41.67
Bra022614.1-P	Field mustard	plastid	41.67	41.6
Bra005051.1-P	Field mustard	plastid	33.67	32.25
Bra005049.1-P	Field mustard	plasma membrane	15.99	31.65
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.56	30.37
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.88	30.19
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	36.22	29.34
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.86	29.0
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.69	28.73
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	36.22	28.63
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.01	27.97
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.2	27.9
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	27.89	25.59
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.38	25.24
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.4	25.0
Bra019051.1-P	Field mustard	plasma membrane	26.53	24.49
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.87	23.9
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.36	23.85
Bra025152.1-P	Field mustard	plastid	20.07	23.84
Bra007999.1-P	Field mustard	plasma membrane	26.36	23.52
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.57	23.11
Bra014774.1-P	Field mustard	plasma membrane	24.15	22.43
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.68	22.17
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.37	21.99
Bra009203.1-P	Field mustard	plasma membrane	28.06	21.85
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.04	21.57
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.55	21.54
Bra014776.1-P	Field mustard	cytosol	36.05	16.51
Bra033441.1-P	Field mustard	plastid	28.23	14.66

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra030948	EnsemblPlants:Bra030948.1	EnsemblPlants:Bra030948.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	UniProt:M4EQ77	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF441	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002545804	SEG:seg	:	:

Description

AT1G53270 (E=1e-285) | ABC transporter family protein

Coordinates

chrA08:-:1007674..1009440

Molecular Weight (calculated)

66205.1 Da

IEP (calculated)

9.767

GRAVY (calculated)

0.086

Length

588 amino acids

Sequence
(BLAST)

001: MELPVKAPVS GCRKISYKLE TKNLSYRLYG NTSKFSNLCG LLNEKEEKVI LKDVSCDARS GEITAIAGPS GAGKTTLLEI LAGKVSQGKV SGQVLVNGRP
101: MNGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTN RKEAKAKVKK LMEELGLEHV ADSRIGEGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVMLLKDMTI KQGKTIVLTI HQPGFRILEQ INRIVLLSSG LVVQNGSVNS LYQKIKFFGH QIPRRVNVLE YAIDIAGSLE PVLTQSCREI
301: SCYGHGKTWK SNNAGREFHQ PDSHSNSVLE EVQILGQRSC KNIFRTKQLF TTRALQASIA GLILGSIYLN VGNQKQEGRV LRTGFFAFTL TFLLSSTTEG
401: LPIFLQDRRI LMRETSRRAY RVLSYVLADT LIFIPFLLII SMLFATPVYW LVGLRRELDG FLYFSLVIWI VLLMSNSFVA CFSALVPNFI MGTSVISGLM
501: GSFFLFSGYF IAKDRIPVYW EFMHYLSLFK YPFECLMINE YRGDVFLKEQ DLEESQKWSN LGIMASFIVG YRVLGFFILW YRCYKTKR

Best Arabidopsis Sequence Match ( AT1G53270.1 )
(BLAST)

001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS

Arabidopsis Description

ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.