Factsheet for Bra026352.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89252	Canola	cytosol, peroxisome, plasma membrane	100.0	100.0
Bra019051.1-P	Field mustard	plasma membrane	90.6	90.74
AT4G27420.1	Thale cress	cytosol, peroxisome, plasma membrane	82.76	82.76
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.58	66.13
PGSC0003DMT400039671	Potato	plasma membrane	55.17	63.31
PGSC0003DMT400049667	Potato	cytosol, peroxisome, plasma membrane	58.78	61.17
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	57.84	60.2
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	59.25	60.19
PGSC0003DMT400039676	Potato	plasma membrane	57.52	58.35
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	57.52	58.25
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	54.23	56.26
GSMUA_Achr2P02720_001	Banana	mitochondrion	51.25	54.96
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	53.45	53.2
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.7	52.25
KRH20507	Soybean	cytosol	49.37	50.08
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.81	46.92
Bra025152.1-P	Field mustard	plastid	36.36	46.87
Bra007999.1-P	Field mustard	plasma membrane	48.28	46.74
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.98	46.49
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.96	46.29
Bra009203.1-P	Field mustard	plasma membrane	46.4	39.21
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	45.77	38.83
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.13	37.59
Bra013916.1-P	Field mustard	plastid	24.76	27.57
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.24	27.38
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.65	26.9
Bra022614.1-P	Field mustard	plastid	24.76	26.83
Bra002234.1-P	Field mustard	cytosol	19.91	26.46
Bra033441.1-P	Field mustard	plastid	45.92	25.88
Bra005051.1-P	Field mustard	plastid	24.45	25.41
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	28.84	25.34
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.96	24.33
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.96	24.29
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.8	24.08
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.18	23.89
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.49	23.64
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	26.8	22.98
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.02	22.37
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.55	22.12
Bra014774.1-P	Field mustard	plasma membrane	20.85	21.01
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.43	18.5
Bra005049.1-P	Field mustard	plasma membrane	7.99	17.17
Bra014776.1-P	Field mustard	cytosol	27.9	13.86

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra026352	EnsemblPlants:Bra026352.1	EnsemblPlants:Bra026352.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:M4EC43	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF257	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0002545B0F	SEG:seg	:	:	:

Description

AT4G27420 (E=4e-295) | ABC transporter family protein

Coordinates

chrA01:-:9838791..9841273

Molecular Weight (calculated)

70990.5 Da

IEP (calculated)

8.656

GRAVY (calculated)

0.086

Length

638 amino acids

Sequence
(BLAST)

001: MDNQEVAIDV EAQIENNNDD RTLPFSIFKK ANLPITLKFE NVVYTVKVKE PKSWLSQTKV KTEEMTILKG INGIVKPGEI LAMLGPSGSG KTSLLTALGG
101: RISEGKGKLT GNISYNNKPF SKGVKRATGF VTQDDALYPH LTVTETLVFT ALLRLPNSFK KQEKIKQAEA VVTELGLDRC KNTIIGEPFL RGVSGGERKR
201: VSIGQEILIN PSLLFLDEPT SGLDSTTAQR IVSILWELAR GGRTVVTTIH QPSSRLFYMF DKILLLSEGN PIYFGLGSNA MDYFGSVGYS PSVERINPSD
301: FLLDIANGVG SDELQRPEAL KEALVAVYKT TLLDNVINDL KGQDGHCTQS IESLGDSKHF GDWPTTWWQQ FCVLSERGLK HRRHDSFSGL KIGQVFVVSF
401: LCGLLWWKTD LFHLQDQIGL LFFVSSFWAF FPLFQQIFTF PEERRMLEKE RSSGMYRLSS YFMSRIVGDL PMELILPTIF LIITYWMAGL NPKPANFLLT
501: LLVLLAHVLV SGGLGLALGA LVMDQKTATT LGSVMMLTFL LAGGYYVRHV PVFIAWIKYV SISYYTYKLL ILGQYTENEW YPCGENGNSK CHVGDFEGIK
601: LIGFHSGLAS SFALAAMLVG YRVVAYIALM RIGKTKAG

Best Arabidopsis Sequence Match ( AT4G27420.1 )
(BLAST)

001: MDNQEVSMDV ETPIAKTNDD RSLPFSIFKK ANNPVTLKFE NLVYTVKLKD SQGCFGKNDK TEERTILKGL TGIVKPGEIL AMLGPSGSGK TSLLTALGGR
101: VGEGKGKLTG NISYNNKPLS KAVKRTTGFV TQDDALYPNL TVTETLVFTA LLRLPNSFKK QEKIKQAKAV MTELGLDRCK DTIIGGPFLR GVSGGERKRV
201: SIGQEILINP SLLFLDEPTS GLDSTTAQRI VSILWELARG GRTVVTTIHQ PSSRLFYMFD KLLLLSEGNP VYFGLGSNAM DYFASVGYSP LVERINPSDF
301: LLDIANGVGS DESQRPEAMK AALVAFYKTN LLDSVINEVK GQDDLCNKPR ESSRVATNTY GDWPTTWWQQ FCVLLKRGLK QRRHDSFSGM KVAQIFIVSF
401: LCGLLWWQTK ISRLQDQIGL LFFISSFWAF FPLFQQIFTF PQERAMLQKE RSSGMYRLSP YFLSRVVGDL PMELILPTCF LVITYWMAGL NHNLANFFVT
501: LLVLLVHVLV SGGLGLALGA LVMDQKSATT LGSVIMLTFL LAGGYYVQHV PVFISWIKYV SIGYYTYKLL ILGQYTANEL YPCGDNGKLR CHVGDFEGIK
601: HIGFNSGLVS ALALTAMLVV YRVIAYIALT RIGKTKSG

Arabidopsis Description

ABCG9ABCG9 [Source:UniProtKB/TrEMBL;Acc:A0A178V178]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.