Factsheet for Bra013916.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89396	Canola	plasma membrane	99.13	99.13
AT4G25750.1	Thale cress	plasma membrane	87.26	86.66
Bra022614.1-P	Field mustard	plastid	79.93	77.76
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	57.77	70.43
VIT_16s0050g01620.t01	Wine grape	cytosol	72.43	69.51
Solyc03g007690.1.1	Tomato	plastid	69.11	66.33
PGSC0003DMT400053843	Potato	cytosol, plasma membrane, plastid	68.76	66.11
KRG91599	Soybean	cytosol, plastid	64.75	64.97
GSMUA_Achr7P10690_001	Banana	cytosol	49.39	60.73
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	57.24	58.68
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	46.42	54.73
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	57.42	53.24
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	57.42	52.06
HORVU7Hr1G081250.1	Barley	mitochondrion	57.42	49.85
TraesCS7A01G342000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	57.42	49.7
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	57.24	49.55
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	56.89	49.24
Bra002234.1-P	Field mustard	cytosol	36.65	43.75
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.11	42.01
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.58	38.61
Bra005051.1-P	Field mustard	plastid	31.94	29.8
Bra005049.1-P	Field mustard	plasma membrane	14.66	28.28
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.68	27.61
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.16	26.84
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.81	26.59
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	33.33	26.31
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.94	25.77
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	33.33	25.67
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.76	25.45
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.29	24.93
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.57	24.76
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	27.23	24.34
Bra019051.1-P	Field mustard	plasma membrane	26.7	24.02
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.75	23.8
Bra007999.1-P	Field mustard	plasma membrane	26.53	23.07
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.53	23.0
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.65	22.62
Bra014774.1-P	Field mustard	plasma membrane	24.61	22.27
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.83	21.73
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.23	21.46
Bra025152.1-P	Field mustard	plastid	17.98	20.81
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.68	20.4
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.7	20.35
Bra009203.1-P	Field mustard	plasma membrane	26.35	20.0
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.31	19.67
Bra014776.1-P	Field mustard	cytosol	34.03	15.19
Bra033441.1-P	Field mustard	plastid	26.7	13.52

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra013916	EnsemblPlants:Bra013916.1	EnsemblPlants:Bra013916.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:M4DBQ6	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF290	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0002546A13	SEG:seg	:	:	:

Description

AT4G25750 (E=4e-247) | ABC transporter family protein

Coordinates

chrA01:-:8427894..8429615

Molecular Weight (calculated)

63892.5 Da

IEP (calculated)

9.474

GRAVY (calculated)

0.409

Length

573 amino acids

Sequence
(BLAST)

001: MESNTLTTSS ISYTKPLPPL FPTAEPSSYI LRNISLTSHP SQILAIVGPS GAGKSTLLDI LAARTSPTSG SILVNSLPIN PSSYRKISSY VPQHDAFFPL
101: LTVSETFTFS ASLLLSKSPS ETSNAVASLL QELNLTHLAH TRLGQGLSGG ELRRVSIGLS LLHDPGFLLL DEPTSGLDSK SAFDVVQILK SVATSRQRTV
201: ILSIHQPSFK ILFLIDRLLL LSKGSVVYHG RLDLLEGFLL SKGFTVPPQI NSLEYAMEIL QNLHDPYENA DIVLPGPQEP QKQNTKQIYR SSRITEVTLL
301: SRRFWKIIYR TRQLLLTNIL EALIVGLVLG TIYLNIGTGK AGIEKRFGLF AFTLTFLLSS TTQTLPIFID ERPILLRETS SGLYRLSSHI LANTLVFLPY
401: LLLIAIIYSV SLYFLVGLCL SWQAFAYFVL VIWIIVLMAN SFVLFLSSLA PNYIAGTSLV TVLLAAFFLF SGYFISKESL PKYWLFMYFF SMYKYALDSL
501: LINEYSCLAN KCLVWFGEGD VKGCLLTGGD VLDKKGLDER QRWTNVYVLL GFFVLYRLLC FLVLLKRVSS SRR

Best Arabidopsis Sequence Match ( AT4G25750.1 )
(BLAST)

001: MESYTLSTSS ISYAKPLSPL LLTAEQPSFI LRNITLTSHP SQILAIIGPS GAGKSTLLDI LAARTSPTSG SILLNSVLIN PSSYRKISSY VPQHDTFFPL
101: LTVSETFTFS ASLLLPKNLS KVSSVVASLL KELNLTHLAH TRLGQGLSGG ERRRVSIGLS LLHDPEVLLL DEPTSGLDSK SAFDVVQILK SIATSRERIV
201: ILSIHQPSFK ILSLIDRVLL LSKGTIVYHG RLDLLEAFLL SKGFTVPSQL NSLEYAMEIL QNIRDPYENA NIALPDHCPE SKKQNQKQSI VRYKSSRITE
301: ISLLSSRFWK IIYRTRQLLL TNILESLVVG LVLGTIYLNI GTGKEGIRKR FGLFAFTLTF LLSSTTQTLP IFIDERPILL RETSSGLYRL SSHILANTLV
401: FLPYLLLIAI IYSVSLYFLV GLCFSWQALA YFVLVIWIIV LMANSFVLFL SSLAPNYIAG TSSVTILLAA FFLFSGYFIS KESLPKYWLF MYFFSMYKYA
501: LDALLINEYS CLHNKCLVWF EEASVNSCLV TGGDVLDKNG LHERQRWFNV YMLLGFFVLY RVLCFLVLLK RVSGSKR

Arabidopsis Description

ABCG4ABC transporter G family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW08]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.