Factsheet for Bra007999.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03668	Canola	plasma membrane	99.85	95.92
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	96.81	93.27
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	87.86	87.59
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	85.58	86.77
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	85.43	85.05
PGSC0003DMT400002293	Potato	cytosol, peroxisome, plasma membrane	59.64	65.17
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	28.22	64.14
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	62.97	61.94
KRH34992	Soybean	cytosol, plasma membrane, plastid	62.06	61.14
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	61.46	60.99
Solyc11g018690.1.1	Tomato	cytosol	31.11	59.94
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	56.45	57.67
Os11t0177400-01	Rice	plasma membrane	41.27	57.51
GSMUA_Achr11P...	Banana	plasma membrane	52.35	56.93
Zm00001d053049_P001	Maize	plasma membrane	52.2	54.09
Zm00001d004762_P001	Maize	plasma membrane	51.75	53.96
TraesCS4D01G092000.1	Wheat	plasma membrane	51.75	52.62
KXG27901	Sorghum	plasma membrane, plastid	51.75	52.54
TraesCS4A01G216900.1	Wheat	plasma membrane, plastid	51.44	52.4
TraesCS4B01G095200.1	Wheat	plastid	50.99	52.17
HORVU4Hr1G018800.7	Barley	plastid	50.53	51.87
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	52.2	50.74
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.74	48.28
Bra019051.1-P	Field mustard	plasma membrane	46.59	48.19
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	46.28	47.58
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.5	46.86
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	45.68	41.4
Bra025152.1-P	Field mustard	plastid	30.96	41.21
Bra009203.1-P	Field mustard	plasma membrane	42.03	36.69
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.58	36.44
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.03	35.83
Bra005051.1-P	Field mustard	plastid	26.4	28.34
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.56	27.69
Bra022614.1-P	Field mustard	plastid	23.98	26.83
Bra013916.1-P	Field mustard	plastid	23.07	26.53
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.07	26.47
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	29.14	26.45
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.52	26.36
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.22	26.31
Bra002234.1-P	Field mustard	cytosol	19.12	26.25
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.47	25.57
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	28.53	25.27
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.38	25.2
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.01	25.07
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.01	24.9
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.01	24.15
Bra033441.1-P	Field mustard	plastid	40.97	23.85
Bra014774.1-P	Field mustard	plasma membrane	21.4	22.27
Bra005049.1-P	Field mustard	plasma membrane	10.02	22.22
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.53	19.87
Bra014776.1-P	Field mustard	cytosol	28.98	14.88

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	EnsemblPlantsGene:Bra007999
EnsemblPlants:Bra007999.1	EnsemblPlants:Bra007999.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:M4CUV4	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF225	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0002546E18	SEG:seg	:	:	:	:

Description

AT1G71960 (E=3e-298) | ABC transporter family protein

Coordinates

chrA02:-:12430267..12435434

Molecular Weight (calculated)

72918.5 Da

IEP (calculated)

9.294

GRAVY (calculated)

0.205

Length

659 amino acids

Sequence
(BLAST)

001: MSGFDGVENQ RNGLDLSARL PQDPRSLLSS SSPCFPITLK FVDVCYRVKI HGKTGESGKI QRLLGLDHKP SDETTSTEER TILSGVTGMV SPGEFMAVLG
101: PSGSGKSTLL NAIAGRLHGP ALTGKILMND VKPTKQTLKR TGFVAQDDLL YPHLTVRETL VFVALLRLPR SLTRHEKIKA AESVISELGL EKCENTVVGN
201: TFIRGISGGE RKRVSIAHEL LINPSLLVLD EPTSGLDATA ALRLVQTLSW VAHGRGKAVV TSIHQPSSRV FQMFDTVLLL SEGKFLFYGK GRDAMAYFES
301: VGFSPAFPMN PADFLLDLAN GVCQIDGMTE REKPNVKQTL SVAYNTMLAP NVKTCIDAAP SLGDNMRFVK TRENAHGITS GIATWFSQLC ILLHRLLKER
401: RHESFDALRV FQVIASSLLS GLMWWHSDYR DVHDRLGLLF FISIFWGVIP SFNAVFTFPQ ERAIFTRERS SGMYTLSSYF MAHVIGSLSM ELVLPAVFLT
501: LTYWMVGLRP GLVPFLLTLF VLLLYVLASQ GLGLALGGAI MDAKKASTIV TVTMLAFVLT GGYYVNKVPY GMVWMKYIST TFYCYRLLIA IQYGNGDEIL
601: RMFGCEPKRA QGTAMTAGCR FMEEEVVGDI GMWTSVSVLF FMFASYRVLA YLALRRIKL

Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)

001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH

Arabidopsis Description

ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.