CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34992	Soybean	cytosol, plasma membrane, plastid	93.13	93.27
PGSC0003DMT400002293	Potato	cytosol, peroxisome, plasma membrane	65.37	72.64
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	31.34	72.41
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.75	71.39
Solyc11g018690.1.1	Tomato	cytosol	33.28	65.2
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.69	63.54
Bra007999.1-P	Field mustard	plasma membrane	61.94	62.97
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	60.3	62.64
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.75	62.62
CDX68292	Canola	cytosol, peroxisome, plasma membrane	60.75	62.62
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	61.19	61.93
GSMUA_Achr11P...	Banana	plasma membrane	55.67	61.55
CDX72849	Canola	cytosol, peroxisome, plasma membrane	62.54	61.44
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	62.09	60.82
CDX96366	Canola	cytosol	33.43	60.7
CDY36671	Canola	plasma membrane	31.34	60.69
CDY03668	Canola	plasma membrane	61.94	60.5
CDY36670	Canola	cytosol	32.39	59.78
Os11t0177400-01	Rice	plasma membrane	42.09	59.62
Zm00001d053049_P001	Maize	plasma membrane	54.93	57.86
Zm00001d004762_P001	Maize	plasma membrane	54.33	57.59
CDX96365	Canola	plasma membrane	32.99	57.25
KXG27901	Sorghum	plasma membrane, plastid	54.93	56.7
TraesCS4A01G216900.1	Wheat	plasma membrane, plastid	54.63	56.57
HORVU4Hr1G018800.7	Barley	plastid	54.18	56.54
TraesCS4D01G092000.1	Wheat	plasma membrane	54.33	56.17
TraesCS4B01G095200.1	Wheat	plastid	53.58	55.75
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	54.48	53.83
KRH55354	Soybean	cytosol, peroxisome, plasma membrane	46.42	49.84
KRH22136	Soybean	cytosol, peroxisome, plasma membrane	46.27	49.44
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	46.72	48.08
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	46.72	47.71
KRH34780	Soybean	cytosol, peroxisome, plasma membrane	48.06	47.08
KRG92003	Soybean	cytosol	47.91	47.07
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	46.12	46.89
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	46.12	46.82
KRH75541	Soybean	cytosol, peroxisome, plasma membrane, plastid	47.31	46.76
KRH37571	Soybean	cytosol, peroxisome, plasma membrane, plastid	42.69	45.91
KRH71117	Soybean	cytosol, peroxisome, plasma membrane, plastid	46.27	45.32
KRH20507	Soybean	cytosol	40.15	42.77
KRH46415	Soybean	plasma membrane	29.55	40.49
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	40.0	39.3
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	41.64	37.8
KRH14200	Soybean	cytosol	38.66	37.76
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	38.66	37.76
KRH68048	Soybean	plastid	41.49	37.57
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	41.19	37.5
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	41.34	37.28
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	26.12	28.69
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	26.12	28.64
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	25.52	27.58
KRG89682	Soybean	cytosol, nucleus, peroxisome	25.82	26.37
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	25.67	26.3
KRH64027	Soybean	extracellular	25.07	26.25
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	25.22	26.04
KRH50602	Soybean	plastid	25.37	25.95
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	28.66	25.6
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	28.06	25.54
KRH67592	Soybean	plastid	27.76	25.34
KRH35792	Soybean	plasma membrane	27.31	25.24
KRG90976	Soybean	plasma membrane	26.72	25.04
KRG91599	Soybean	cytosol, plastid	21.04	24.69
KRH39507	Soybean	cytosol	26.72	24.52
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	24.33	24.29
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	16.42	23.4
KRH60557	Soybean	cytosol	25.37	21.28
KRH41868	Soybean	cytosol	25.07	21.16

Protein Annotations

EntrezGene:100812367	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
EMBL:ACUP02012707	EnsemblPlantsGene:GLYMA_20G174800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	UniProt:I1NH97	InterPro:IPR003439	EnsemblPlants:KRG91794	ProteinID:KRG91794	ProteinID:KRG91794.1
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF225
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000233DB06	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:-:41210053..41217850

Molecular Weight (calculated)

73943.3 Da

IEP (calculated)

9.776

GRAVY (calculated)

0.083

Length

670 amino acids

Sequence
(BLAST)

001: MSTPTSTAAF AGVETPNGDS SNTNPHPKHT PQESRDLSPF LSCSYPITLK FMDVAYRLKI EDKQKSGGSI KRFFTPHESS PSDQGSRAGA PKERTILKGV
101: TGIAQPGEIL AVLGPSGSGK STLLHALAGR LHGPGLTGTI LANSSKLTKP VLRRTGFVTQ DDILYPHLTV RETLVFCAML RLPRALLRSE KVAAAEAAIA
201: ELGLGKCENT IIGNSFIRGV SGGERKRVSI AHEMLVNPSL LILDEPTSGL DSTAAHRLVL TLGSLAKKGK TVITSVHQPS SRVYQMFDKV VVLTEGQCLY
301: FGKGSDAMRY FQSVGFAPSF PMNPADFLLD LANGVCHVDG QSEKDKPNIK QSLIHSYNTV LGPKVKAACM DTANVPTKNT HPWRSNSSKE FRRSNRVGFL
401: DWFYQFSILL QRSLKERKHE SFNTLRVCQV IAAALLAGLM WWHSDYRNIQ DRLGLLFFIS IFWGVFPSFN SVFAFPQERT IFMKERASGM YTLSSYFMAR
501: IVGDLPMELI LPTIFLIVTY WMGGLKPDLW AFLLTLLVVL GYVMVSQGLG LALGAAIMDA KQASTVAAVT MLAFVLTGGY YVHKVPSCMA WIKYISTTFY
601: CYRLLTRIQY EDGKKISYLL GCYHGDKGGC RFVEEDVVGQ IGTLGCIGVL LFMFVFYRLL AYLALRRIKS

Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)

001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH

Arabidopsis Description

ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.