CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37571	Soybean	cytosol, peroxisome, plasma membrane, plastid	87.91	95.67
KRH71117	Soybean	cytosol, peroxisome, plasma membrane, plastid	87.91	87.13
KRG92003	Soybean	cytosol	76.84	76.39
KRH34780	Soybean	cytosol, peroxisome, plasma membrane	76.7	76.02
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.17	69.38
CDY48079	Canola	plastid	64.01	65.26
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	64.9	65.19
AT3G25620.2	Thale cress	cytosol, nucleus, plasma membrane, plastid	64.45	65.03
CDY51602	Canola	plastid	63.86	65.02
PGSC0003DMT400019318	Potato	cytosol, nucleus, peroxisome	64.6	64.89
CDY46506	Canola	cytosol, peroxisome, plasma membrane	63.72	64.67
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.27	64.22
CDX99764	Canola	cytosol, peroxisome, plasma membrane	63.27	62.63
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	56.64	58.54
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	56.64	58.18
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	55.75	58.06
Bra025152.1-P	Field mustard	plastid	42.33	57.98
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	55.9	57.51
KRH22136	Soybean	cytosol, peroxisome, plasma membrane	49.7	53.75
KRH55354	Soybean	cytosol, peroxisome, plasma membrane	46.76	50.8
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	46.76	47.31
KRH34992	Soybean	cytosol, plasma membrane, plastid	46.17	46.79
KRH20507	Soybean	cytosol	42.04	45.31
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	43.22	39.7
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	42.77	39.4
KRH68048	Soybean	plastid	42.77	39.19
KRH46415	Soybean	plasma membrane	28.17	39.06
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	42.77	39.03
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	38.64	38.42
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	38.64	38.19
KRH14200	Soybean	cytosol	38.5	38.05
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	24.48	27.21
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	24.48	27.17
KRH50602	Soybean	plastid	25.66	26.56
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	23.89	26.13
KRG89682	Soybean	cytosol, nucleus, peroxisome	24.93	25.76
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	17.7	25.53
KRH64027	Soybean	extracellular	24.04	25.47
KRG91599	Soybean	cytosol, plastid	20.94	24.87
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	23.75	24.81
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	23.75	24.62
KRH35792	Soybean	plasma membrane	26.25	24.55
KRG90976	Soybean	plasma membrane	25.52	24.2
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	26.7	24.13
KRH67592	Soybean	plastid	25.96	23.98
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	25.96	23.91
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	23.16	23.4
KRH39507	Soybean	cytosol	24.63	22.88
KRH41868	Soybean	cytosol	25.37	21.66
KRH60557	Soybean	cytosol	25.37	21.53

Protein Annotations

EntrezGene:100810165	MapMan:11.4.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:ACUP02000375	EnsemblPlantsGene:GLYMA_01G091100	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	UniProt:I1J6T0	InterPro:IPR003439	EnsemblPlants:KRH75541
ProteinID:KRH75541	ProteinID:KRH75541.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF303	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI00023BBAE7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:27547569..27553436

Molecular Weight (calculated)

75868.4 Da

IEP (calculated)

8.414

GRAVY (calculated)

0.092

Length

678 amino acids

Sequence
(BLAST)

001: MMPPQQETSI TSNIPAITNR PENSSAHAEP PGSATNDIKP TFTINDIHNH TSQNHQVAPS APRFSILQQS LRPVTLKFED VSYSITFGRD NNGCVSPQKP
101: KHTRTVLNGV TGMVGPGEVM AMLGPSGSGK TTLLTALAGR LDGKLSGAIT YNGHPFSSSM KRNIGFVSQD DVLYPHLTVL ESLTYAAMLK LPKSLTREEK
201: MEQVEMIIVD LGLSRCRNSP VGGGAALFRG ISGGERKRVS IGQEMLVNPS LLLLDEPTSG LDSTTAQRIM AMLQSLAGAY RTVVTTIHQP SSRLYWMFDK
301: VVVLSDGYPI FTGQTDQVMD YLESIGFVPV FNFVNPADFL LDLANGIVAD AKQEEQIDHH EDQASIKQFL VSSYKKNLYP LLKQEIQQNH RELAFLTSGA
401: PRSSENQWTT SWWEQFMVLL KRGLMERRHE SYSRLRIFQV LSVSILSGLL WWHSDPSHIH DQVGLLFFFS IFWGFFPLFN AVFAFPLERP MLMKERSSGM
501: YHLSSYYVAR MVGDLPMEFV LPTIFVTISY WMGGLKPSLV TFVLTLLIML FNVLVSQGIG LALGAILMDV KQATTLASVT MLVFLLAGGY YIRHIPFFIA
601: WLKYISFSHY CYKLLVGVQY SVNEVYQCRQ GLHYRIRDFP AIKCLGLDSL WGDVAVLAVM LIGYRVVAYL ALRMGLHH

Best Arabidopsis Sequence Match ( AT3G25620.2 )
(BLAST)

001: MMPPNEQESS FPKTPSANRH ETSPVQENRF SSPSHVNPCL DDDNDHDGPS HQSRQSSVLR QSLRPIILKF EELTYSIKSQ TGKGSYWFGS QEPKPNRLVL
101: KCVSGIVKPG ELLAMLGPSG SGKTTLVTAL AGRLQGKLSG TVSYNGEPFT SSVKRKTGFV TQDDVLYPHL TVMETLTYTA LLRLPKELTR KEKLEQVEMV
201: VSDLGLTRCC NSVIGGGLIR GISGGERKRV SIGQEMLVNP SLLLLDEPTS GLDSTTAARI VATLRSLARG GRTVVTTIHQ PSSRLYRMFD KVLVLSEGCP
301: IYSGDSGRVM EYFGSIGYQP GSSFVNPADF VLDLANGITS DTKQYDQIET NGRLDRLEEQ NSVKQSLISS YKKNLYPPLK EEVSRTFPQD QTNARLRKKA
401: ITNRWPTSWW MQFSVLLKRG LKERSHESFS GLRIFMVMSV SLLSGLLWWH SRVAHLQDQV GLLFFFSIFW GFFPLFNAIF TFPQERPMLI KERSSGIYRL
501: SSYYIARTVG DLPMELILPT IFVTITYWMG GLKPSLTTFI MTLMIVLYNV LVAQGVGLAL GAILMDAKKA ATLSSVLMLV FLLAGGYYIQ HIPGFIAWLK
601: YVSFSHYCYK LLVGVQYTWD EVYECGSGLH CSVMDYEGIK NLRIGNMMWD VLALAVMLLL YRVLAYLALR NL

Arabidopsis Description

ABCG21ABC transporter G family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA72]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.