Factsheet for Bra025152.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 2
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48079	Canola	plastid	93.33	69.47
CDY51602	Canola	plastid	90.51	67.27
AT3G25620.2	Thale cress	cytosol, nucleus, plasma membrane, plastid	86.46	63.69
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	84.04	62.28
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.22	45.56
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	59.6	43.7
KRG92003	Soybean	cytosol	59.8	43.4
KRH71117	Soybean	cytosol, peroxisome, plasma membrane, plastid	59.8	43.27
PGSC0003DMT400019318	Potato	cytosol, nucleus, peroxisome	58.99	43.26
KRH34780	Soybean	cytosol, peroxisome, plasma membrane	59.39	42.98
KRH75541	Soybean	cytosol, peroxisome, plasma membrane, plastid	57.98	42.33
KRH37571	Soybean	cytosol, peroxisome, plasma membrane, plastid	49.49	39.33
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	50.3	38.85
Bra019051.1-P	Field mustard	plasma membrane	47.47	36.89
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.87	36.36
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.51	34.39
Bra007999.1-P	Field mustard	plasma membrane	41.21	30.96
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.2	30.62
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.61	30.41
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.36	26.43
Bra009203.1-P	Field mustard	plasma membrane	40.2	26.36
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.0	26.33
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.26	20.57
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.84	20.07
Bra014774.1-P	Field mustard	plasma membrane	25.05	19.59
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.69	19.27
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	28.08	19.15
Bra005051.1-P	Field mustard	plastid	23.64	19.06
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.07	18.95
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.87	18.79
Bra033441.1-P	Field mustard	plastid	42.42	18.55
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.46	18.32
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	27.47	18.28
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.06	18.17
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.66	18.17
Bra002234.1-P	Field mustard	cytosol	17.58	18.12
Bra013916.1-P	Field mustard	plastid	20.81	17.98
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.67	17.79
Bra022614.1-P	Field mustard	plastid	21.01	17.66
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.08	14.69
Bra014776.1-P	Field mustard	cytosol	26.26	10.12
Bra005049.1-P	Field mustard	plasma membrane	1.82	3.03

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra025152
EnsemblPlants:Bra025152.1	EnsemblPlants:Bra025152.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	UniProt:M4E8P6
InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF303
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000253F786	SEG:seg	:	:

Description

AT3G25620 (E=1e-217) | ABC transporter family protein

Coordinates

chrA06:+:23182195..23185662

Molecular Weight (calculated)

54418.0 Da

IEP (calculated)

9.812

GRAVY (calculated)

-0.345

Length

495 amino acids

Sequence
(BLAST)

001: MPPNEQESSF PKTPGANQGV TSPVQETRFS SPSHVIPGHD GPSHQSRQSS VLRQSLRPII LKFEELTYSI TSQTGKRSYW FGSQEPKPNR FVLNGVSGIV
101: KPGELLAMLG PSGSGKTTLV TALAGRLHGK LSGTVSYNGE PFTSAVKRKT GFVTQEDVLY PHLTVMETLT YTALLRLPKE LTRKEKIEQT ETVVSDLGLN
201: RCSNSVIGGG LVRGISGGER KRVGIGQEML VNPSLLLLDE PTSGLDSTTA ARIVATLRTL ARGGRTVVTT IHQPSSRLYR MFDKVLVLSE GSPIYSGDSG
301: RVMEYFGSIG FQPGSSFVNP ADFVLDLANG ITSDTKQHDQ VDINGRLDRL EEQNSVKQSL ISSYKNNLYP PLKEEVSRTY PQDQTANGSR AKSLTNRWPT
401: SWWMQFSVLL KRGLKERSHE SFSGLRIFMV MSVSILSGLL WWHSRVAHIQ DQEVYCELFL VESIIKSGSS GRAKLPGSDS RINCDSSFCG RRLCG

Best Arabidopsis Sequence Match ( AT3G25620.2 )
(BLAST)

001: MMPPNEQESS FPKTPSANRH ETSPVQENRF SSPSHVNPCL DDDNDHDGPS HQSRQSSVLR QSLRPIILKF EELTYSIKSQ TGKGSYWFGS QEPKPNRLVL
101: KCVSGIVKPG ELLAMLGPSG SGKTTLVTAL AGRLQGKLSG TVSYNGEPFT SSVKRKTGFV TQDDVLYPHL TVMETLTYTA LLRLPKELTR KEKLEQVEMV
201: VSDLGLTRCC NSVIGGGLIR GISGGERKRV SIGQEMLVNP SLLLLDEPTS GLDSTTAARI VATLRSLARG GRTVVTTIHQ PSSRLYRMFD KVLVLSEGCP
301: IYSGDSGRVM EYFGSIGYQP GSSFVNPADF VLDLANGITS DTKQYDQIET NGRLDRLEEQ NSVKQSLISS YKKNLYPPLK EEVSRTFPQD QTNARLRKKA
401: ITNRWPTSWW MQFSVLLKRG LKERSHESFS GLRIFMVMSV SLLSGLLWWH SRVAHLQDQV GLLFFFSIFW GFFPLFNAIF TFPQERPMLI KERSSGIYRL
501: SSYYIARTVG DLPMELILPT IFVTITYWMG GLKPSLTTFI MTLMIVLYNV LVAQGVGLAL GAILMDAKKA ATLSSVLMLV FLLAGGYYIQ HIPGFIAWLK
601: YVSFSHYCYK LLVGVQYTWD EVYECGSGLH CSVMDYEGIK NLRIGNMMWD VLALAVMLLL YRVLAYLALR NL

Arabidopsis Description

ABCG21ABC transporter G family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA72]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.