Factsheet for Bra035353.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65003	Canola	cytosol, peroxisome, plasma membrane	98.32	98.46
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	81.96	82.54
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	82.24	81.1
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	74.27	75.0
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.15	73.97
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.63	72.25
Bra005051.1-P	Field mustard	plastid	55.52	64.66
Bra005049.1-P	Field mustard	plasma membrane	25.59	61.62
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	60.98	60.06
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	59.72	57.39
Bra014774.1-P	Field mustard	plasma membrane	48.81	55.13
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	51.89	54.48
GSMUA_Achr5P28450_001	Banana	plasma membrane	53.15	54.44
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	51.75	54.33
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	50.63	54.19
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	51.61	54.19
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	53.43	54.11
Os05t0120200-01	Rice	plasma membrane	52.87	54.08
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.08	54.04
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	51.47	54.04
Os05t0120000-00	Rice	plasma membrane	51.19	53.82
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	53.15	53.22
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	50.07	53.04
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	50.07	53.04
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	51.33	52.88
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	51.05	52.75
EES17614	Sorghum	cytosol, peroxisome, vacuole	52.03	52.39
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	52.17	52.39
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	51.05	52.14
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	53.99	51.95
Zm00001d035553_P001	Maize	plasma membrane	51.75	51.82
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	56.36	51.01
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	53.99	50.99
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	53.99	50.99
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	53.01	50.87
TraesCS3B01G387500.1	Wheat	plastid	53.71	50.73
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	53.57	50.66
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	56.36	50.63
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	53.43	50.53
Os01t0836600-01	Rice	plasma membrane	52.73	50.33
Zm00001d042953_P001	Maize	plasma membrane	53.29	50.07
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	55.38	50.0
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	55.66	50.0
Os03t0281900-01	Rice	cytosol, plasma membrane	54.69	49.68
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	55.38	47.09
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	50.91	46.13
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.64	42.81
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	52.73	41.94
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	36.22	39.48
HORVU5Hr1G021110.1	Barley	cytosol	23.08	38.46
HORVU4Hr1G058070.2	Barley	cytosol	42.66	37.42
Bra014776.1-P	Field mustard	cytosol	61.54	34.27
Os03t0282100-00	Rice	cytosol, nucleus, plastid	36.5	34.07
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.97	34.01
Bra002234.1-P	Field mustard	cytosol	22.52	33.54
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.53	32.28
Bra022614.1-P	Field mustard	plastid	26.43	32.09
Bra013916.1-P	Field mustard	plastid	25.45	31.76
GSMUA_Achr6P08820_001	Banana	plasma membrane	50.07	28.96
Bra019051.1-P	Field mustard	plasma membrane	24.62	27.63
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.9	27.38
Bra007999.1-P	Field mustard	plasma membrane	24.9	27.01
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.9	26.93
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.04	26.8
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	23.92	26.68
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.64	26.49
Bra025152.1-P	Field mustard	plastid	18.32	26.46
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.22	24.38
Bra009203.1-P	Field mustard	plasma membrane	25.73	24.37
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.48	24.07
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.04	23.8
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.08	22.39
Bra033441.1-P	Field mustard	plastid	25.87	16.34

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra035353	EnsemblPlants:Bra035353.1	EnsemblPlants:Bra035353.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:M4F2Q4	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000253E60E	SEG:seg	:	:	:

Description

AT3G55130 (E=2e-304) ATWBC19 | ATWBC19 (White-Brown Complex homolog 19); ATPase, coupled to transmembrane movement of substances

Coordinates

chrScaffold000104:+:110989..113136

Molecular Weight (calculated)

79848.6 Da

IEP (calculated)

7.536

GRAVY (calculated)

0.135

Length

715 amino acids

Sequence
(BLAST)

001: MQRALEEPHC TISVGSPTLV ELLTDCDSFR KEEDSSSVAR SDDPAHSIID VEALHVKPVR FVLAFNNLEY NVTFRRWFDF SRPRSSDTVK TLLDDVSGEA
101: CDGNILAVLG ASGAGKSTLI DALAGRVAKE SLKGSVTLNG ENVLESQLLK VISAYVMQDD LLFPMLTVKE TLMFASEFRL PRSFPKSKKM ERVQALIDQL
201: GLRNAADTVI GDEGHRGVSG GERRRVSIGI DIIHDPIVLF LDEPTSGLDS SNAFMVVQVL KRIAQSGSIV VMSIHQPSTR IIDLLDRLII LSRGKNVFSG
301: SPASLPNFFS NLGHTIPEKE NITEFALDVV RKLEGSTEGT RELVEFNEKW QQSNLGLSQS ARPTPHGLSL KEAIIESVSR GKLVSGSSSG ATYLTSMETV
401: SSYTNPSLFE TFILAKRYMR NWIRMPELLG TRIAIVMVTA FLLATVYWKL DNTPRGAQEK LTFFAFVVPT TFYLCLDNVP VFIQERYIFL RETTRNAYRT
501: SSYVISHSLV SLPQLIAPSL VFSSITFWTV GLHGGLEGFV FYCLIIYASF WSGSSVVTFI SGLVPHIMLS YMVTIAYVAY CLLLSGFYVV RDRIPSYWIW
601: FHYISPIKYP YEAVLINEFD DKSRCFVKGV QVFEGTLLGG VSDMKKVELL ETLSRSLSTR ITQSTCLRTG SDLLSQQGIT QLSKWDCLWI TLASGLFFRI
701: LFYFALLFGS KNKRT

Best Arabidopsis Sequence Match ( AT3G55130.1 )
(BLAST)

001: MNLSLSGRKI AMTRVSAETQ YITPIGSPTL DELLKDCDSF RKGDSGDGVK SDDPAHHIID VEALYVKPVP YVLNFNNLQY DVTLRRRFGF SRQNGVKTLL
101: DDVSGEASDG DILAVLGASG AGKSTLIDAL AGRVAEGSLR GSVTLNGEKV LQSRLLKVIS AYVMQDDLLF PMLTVKETLM FASEFRLPRS LSKSKKMERV
201: EALIDQLGLR NAANTVIGDE GHRGVSGGER RRVSIGIDII HDPIVLFLDE PTSGLDSTNA FMVVQVLKRI AQSGSIVIMS IHQPSARIVE LLDRLIILSR
301: GKSVFNGSPA SLPGFFSDFG RPIPEKENIS EFALDLVREL EGSNEGTKAL VDFNEKWQQN KISLIQSAPQ TNKLDQDRSL SLKEAINASV SRGKLVSGSS
401: RSNPTSMETV SSYANPSLFE TFILAKRYMK NWIRMPELVG TRIATVMVTG CLLATVYWKL DHTPRGAQER LTLFAFVVPT MFYCCLDNVP VFIQERYIFL
501: RETTHNAYRT SSYVISHSLV SLPQLLAPSL VFSAITFWTV GLSGGLEGFV FYCLLIYASF WSGSSVVTFI SGVVPNIMLC YMVSITYLAY CLLLSGFYVN
601: RDRIPFYWTW FHYISILKYP YEAVLINEFD DPSRCFVRGV QVFDSTLLGG VSDSGKVKLL ETLSKSLRTK ITESTCLRTG SDLLAQQGIT QLSKWDCLWI
701: TFASGLFFRI LFYFALLFGS RNKRT

Arabidopsis Description

ABCG19ABC transporter G family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3D6]
SUBAcon: [mitochondrion,peroxisome,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.