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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 1
  • mitochondrion 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, vacuole
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:vacuole
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES18923 Sorghum cytosol, peroxisome, plasma membrane 85.21 84.73
Os05t0120200-01 Rice plasma membrane 80.42 81.69
Zm00001d035553_P001 Maize plasma membrane 81.69 81.23
Bra005049.1-P Field mustard plasma membrane 28.87 69.02
CDY44641 Canola plasma membrane 28.73 68.69
Bra005051.1-P Field mustard plastid 56.06 64.82
CDX74853 Canola plastid 56.06 64.51
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 60.7 59.53
PGSC0003DMT400029838 Potato extracellular 57.89 59.14
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 61.97 59.06
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 60.28 58.95
CDX69629 Canola plastid 60.28 58.79
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 59.86 58.7
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 61.41 58.37
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 59.01 58.36
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 59.72 58.32
KRH67592 Soybean plastid 60.0 58.04
KRG92984 Soybean cytosol, peroxisome, plasma membrane 61.13 57.87
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 59.86 57.74
Solyc05g054890.2.1 Tomato cytosol 60.99 57.73
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 59.72 57.61
KRG95875 Soybean cytosol, peroxisome, plasma membrane 59.58 57.47
Solyc04g010210.1.1 Tomato extracellular 57.61 57.28
AT2G39350.1 Thale cress cytosol 59.58 57.16
CDY09810 Canola plastid 60.42 57.05
CDY02907 Canola cytosol, peroxisome, plasma membrane 50.85 56.85
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 59.44 56.72
AT3G53510.1 Thale cress plasma membrane 58.59 56.29
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 52.39 56.19
CDX93388 Canola plasma membrane 58.45 56.01
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 58.31 55.8
CDY18451 Canola cytosol, peroxisome, plasma membrane 58.17 55.66
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 55.35 55.51
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 59.01 55.5
CDX67624 Canola cytosol, peroxisome, plasma membrane 54.93 55.16
Solyc09g005970.1.1 Tomato plasma membrane 57.32 55.15
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 54.79 55.02
CDX76119 Canola cytosol, peroxisome, plasma membrane 51.55 54.87
PGSC0003DMT400061466 Potato plasma membrane 57.18 54.79
CDX76121 Canola cytosol 36.2 54.56
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 54.37 54.52
CDY40201 Canola cytosol 54.37 54.52
CDX73549 Canola cytosol, peroxisome, plasma membrane 57.75 54.23
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 53.1 53.93
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 53.8 53.8
EER95064 Sorghum cytosol, peroxisome, plasma membrane 60.28 53.77
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 54.23 53.1
CDY37656 Canola cytosol, peroxisome, plasma membrane 52.54 52.31
CDY65003 Canola cytosol, peroxisome, plasma membrane 52.54 52.24
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 52.39 52.03
CDX73404 Canola plasma membrane 54.79 49.3
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 58.17 43.66
CDY50899 Canola cytosol 20.14 42.94
Bra014774.1-P Field mustard plasma membrane 37.04 41.55
EES03493 Sorghum cytosol, peroxisome, plasma membrane 38.17 37.02
EES14035 Sorghum cytosol, peroxisome, plasma membrane 31.41 35.28
EES03276 Sorghum mitochondrion 29.72 34.48
EES01897 Sorghum cytosol, plasma membrane, plastid 31.97 33.73
CDX76122 Canola plasma membrane 59.86 33.15
Bra014776.1-P Field mustard cytosol 59.86 33.1
CDY02906 Canola plasma membrane 59.72 33.0
KXG21900 Sorghum cytosol, peroxisome, plasma membrane 32.11 32.66
OQU80214 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 39.01 31.58
KXG27901 Sorghum plasma membrane, plastid 26.9 29.43
OQU76682 Sorghum mitochondrion, plasma membrane 23.94 28.57
KXG20331 Sorghum cytosol, peroxisome, plasma membrane 26.06 27.82
OQU76684 Sorghum nucleus, peroxisome, plasma membrane 25.92 27.75
OQU76683 Sorghum nucleus, peroxisome, plasma membrane 25.92 27.75
EES13415 Sorghum plastid 28.87 27.37
EES00402 Sorghum endoplasmic reticulum, golgi, plasma membrane 24.65 26.36
EER92832 Sorghum plasma membrane 27.75 25.82
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:8071233InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSUniProt:C5YZ02EnsemblPlants:EES17614ProteinID:EES17614ProteinID:EES17614.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF294
SMART:SM00382EnsemblPlantsGene:SORBI_3009G022500SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0001A88D7ERefSeq:XP_002439184.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:+:1991988..1994120
Molecular Weight (calculated)
76539.9 Da
IEP (calculated)
9.535
GRAVY (calculated)
0.275
Length
710 amino acids
Sequence
(BLAST)
001: MAATGHAVVD IDFPDEAADA AKPPVAPVPY VLHFADLSYS VRTRSKGGGG GLLPSSSSGH RRLVASAATP PPPAPTSSGS SSRRTKTLLD GVSGAARAGE
101: LLAVMGASGS GKSTLLDALA GRIARDSLRG AVTLNGEPLQ GRRLRAISAH VMQDDLLYAM LTVRETLRFA AEFRLPRALS AERKRARVDA LVDQLGLSRA
201: ADTIIGDEGH RGVSGGERRR VSIGTDIIHD PILLFLDEPT SGLDSASAFM VVQVLRRVAQ SGSVVVMTIH QPSTRILGIL DSLLLLSRGR TVYAGTPAGL
301: KPFFAEFGAP VPDNENPAEF ALDTIREYEH QPDGAAPIAD FNVKWQHSSS ASFAAVDNNN NNKLMPLELA IAESVSRGKL VAGSGGTGGG SAVTVPTFAN
401: PPWTEVWVLI KRSFTNTGRM PELFVMRLGT IMVTGFILAT IFWRLDDTPK GVQERLGFFA MAMSTMFYVC ADALPVFVQE RHIYLRETAH NAYRRISYVL
501: ANAVVAFPPL VLLSLAFAVT TFWAVGLAGG ASSFLFFVLI VLASLWAGSG FVTFLSAVVP HVMLGYTVVV AILAYFLLFS GFFITRDRIP DYWIWFHYLS
601: LVKYPYQAVL QNEFGAASRC FSRGVEMFDG TPIGRMPEAM KMKVLEAISA TLGTNVTADT CVVTGADVLA QQAVMDISKW KCLLVTVAWG FFFRVLFYVV
701: LLVGSKNKRK
Best Arabidopsis Sequence Match ( AT2G39350.1 )
(BLAST)
001: MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ
101: TARPKTKTLL NNISGETRDG EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP MLTVEETLMF AAEFRLPRSL
201: PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL
301: LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS
401: RGKLVSGGES VAHGGATTNT TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK GVQERLGFFA FAMSTMFYTC
501: ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV
601: AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR
701: QQGVVQLSKW NCLFITVAFG FFFRILFYFT LLLGSKNKRR
Arabidopsis Description
ABCG1ABC transporter G family member 1 [Source:UniProtKB/Swiss-Prot;Acc:O80946]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.