CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
plasma membrane 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	91.01	91.46
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	74.35	89.74
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	78.76	79.67
TraesCS3A01G221400.1	Wheat	plastid	78.76	79.67
TraesCS3B01G251300.1	Wheat	plastid	78.59	79.5
HORVU3Hr1G054160.1	Barley	plastid	78.92	79.44
Os01t0615500-00	Rice	plastid	79.41	79.28
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	40.85	60.39
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	56.05	55.95
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	52.94	54.64
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	53.92	54.1
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	53.92	54.01
Solyc07g053300.1.1	Tomato	cytosol	51.47	51.81
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	52.45	51.69
PGSC0003DMT400052674	Potato	cytosol, peroxisome, plasma membrane	51.14	51.48
PGSC0003DMT400032370	Potato	plasma membrane	52.12	51.45
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.02	51.02
CDY02516	Canola	cytosol, peroxisome, plasma membrane	49.02	51.02
CDY59400	Canola	cytosol, plasma membrane, plastid	49.02	51.02
AT1G53270.1	Thale cress	plasma membrane	49.18	51.02
EES01897	Sorghum	cytosol, plasma membrane, plastid	47.39	43.09
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	42.32	40.98
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	43.95	38.54
EES17614	Sorghum	cytosol, peroxisome, vacuole	34.48	29.72
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	34.64	29.69
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	35.29	28.99
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	34.48	28.83
KXG27901	Sorghum	plasma membrane, plastid	28.76	27.12
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	33.17	25.5
OQU76682	Sorghum	mitochondrion, plasma membrane	24.02	24.71
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	25.0	23.01
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	32.52	22.69
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	24.51	22.62
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	24.35	22.47
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	24.18	22.29
EES13415	Sorghum	plastid	26.96	22.03
EER92832	Sorghum	plasma membrane	25.65	20.58

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:8054381	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	UniProt:C5XR13	EnsemblPlants:EES03276	ProteinID:EES03276	ProteinID:EES03276.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF182
SMART:SM00382	EnsemblPlantsGene:SORBI_3003G220000	SUPFAM:SSF52540	unigene:Sbi.5126	TMHMM:TMhelix	UniParc:UPI0001A85001
RefSeq:XP_002458156.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:55521438..55523814

Molecular Weight (calculated)

65316.6 Da

IEP (calculated)

9.563

GRAVY (calculated)

0.349

Length

612 amino acids

Sequence
(BLAST)

001: MEATTVMSQG GGGGRRRQRY RIETRALSYV LPPRGARCFL PWSLSAAGGK EEAEERLLLR GVTCEAPPGE LVAIVGPSGA GKTTLLSVLA GSADPARVVG
101: GEVLVDGLPM DAARFRRVSG YVPQDDALFP ALTVEESLVY SARLRLRVGG GGGVGSSASD RARELMAELG LAHVAASRVA DVSGGERRRV SIGMDLVHDP
201: AVLLLDEPTS GLDSGSALHI VKMLRDMAAK HAKTVVLTIH QPGFRILELI DRVVLLADGA VRHHGSLDFL QSRLIATGHA IPAHVNVLEY AMETIDSLKP
301: DVTAVTTITA AAAAAAASAN PVPASARRTG YANSPAAEVR ILAGRFAKTV LRTPQLFAAR MAQSVLAGAF LGSIFLGTTD LQSRLGFFAF NLTYLLSSTT
401: EALPVFLHER RILERETSRG AYRVSSYVAS NAAVFLPFLL AAALLYAAPV YWLVGLAREP AAFAYFALVV WLVMLTANSF VACLSAVAPN YIVGNSVVAG
501: LIGCFFLFSG YFVASKNIPR YWVFMHYASL FKYPFEALVV NEYGGARGAR ECLASAGGAG GICVLDGAGL LRQQGMREGM RWSNLGVMLG FVVGYRLLCF
601: VFLCIRCHRT RR

Best Arabidopsis Sequence Match ( AT1G53270.1 )
(BLAST)

001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS

Arabidopsis Description

ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.