Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59400 | Canola | cytosol, plasma membrane, plastid | 92.71 | 93.03 |
| Bra030948.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 92.37 | 92.69 |
| CDY02516 | Canola | cytosol, peroxisome, plasma membrane | 92.37 | 92.69 |
| VIT_19s0014g01540.t01 | Wine grape | cytosol, plasma membrane, plastid | 65.42 | 62.97 |
| KRH27319 | Soybean | cytosol, mitochondrion, plasma membrane | 64.58 | 62.46 |
| KRH21994 | Soybean | cytosol, peroxisome, plasma membrane | 64.07 | 61.87 |
| PGSC0003DMT400032370 | Potato | plasma membrane | 63.9 | 60.81 |
| Solyc07g062630.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 63.56 | 60.39 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, peroxisome, plasma membrane | 39.32 | 56.04 |
| Zm00001d011350_P001 | Maize | cytosol, peroxisome, plasma membrane | 44.58 | 51.87 |
| TraesCS3A01G221400.1 | Wheat | plastid | 52.88 | 51.57 |
| TraesCS3B01G251300.1 | Wheat | plastid | 52.88 | 51.57 |
| TraesCS3D01G231500.1 | Wheat | mitochondrion, plastid | 52.88 | 51.57 |
| HORVU3Hr1G054160.1 | Barley | plastid | 52.88 | 51.32 |
| Os01t0615500-00 | Rice | plastid | 51.86 | 49.92 |
| Zm00001d044476_P001 | Maize | cytosol, peroxisome, plasma membrane | 51.02 | 49.43 |
| EES03276 | Sorghum | mitochondrion | 51.02 | 49.18 |
| AT2G13610.1 | Thale cress | cytosol, peroxisome, plasma membrane | 47.63 | 43.3 |
| AT5G52860.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 42.71 | 42.78 |
| AT4G25750.1 | Thale cress | plasma membrane | 40.34 | 41.25 |
| AT5G19410.2 | Thale cress | plastid | 41.53 | 38.7 |
| AT3G55100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 34.24 | 30.51 |
| AT3G55110.1 | Thale cress | cytosol, peroxisome, plasma membrane | 35.42 | 29.52 |
| AT3G53510.1 | Thale cress | plasma membrane | 35.93 | 28.69 |
| AT3G55090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 35.59 | 28.53 |
| AT5G13580.1 | Thale cress | cytosol, peroxisome, plasma membrane | 34.75 | 28.2 |
| AT2G39350.1 | Thale cress | cytosol | 35.25 | 28.11 |
| AT3G55130.1 | Thale cress | mitochondrion, peroxisome, plasma membrane | 34.24 | 27.86 |
| AT2G37360.1 | Thale cress | cytosol, peroxisome, plasma membrane | 34.41 | 26.89 |
| AT4G27420.1 | Thale cress | cytosol, peroxisome, plasma membrane | 27.8 | 25.71 |
| AT1G31770.1 | Thale cress | cytosol, nucleus, peroxisome | 28.14 | 25.62 |
| AT3G25620.2 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 28.47 | 25.0 |
| AT1G71960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 26.44 | 23.57 |
| AT3G13220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 26.1 | 22.48 |
| AT5G06530.1 | Thale cress | plasma membrane | 28.47 | 22.37 |
| AT2G01320.3 | Thale cress | peroxisome, plastid, vacuole | 25.93 | 21.02 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:841761 | UniProt:A0A178WBC4 | InterPro:AAA+_ATPase | ProteinID:AAF69534.1 |
| InterPro:ABC_2_trans | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AEE32915.1 | ArrayExpress:AT1G53270 | EnsemblPlantsGene:AT1G53270 |
| RefSeq:AT1G53270 | TAIR:AT1G53270 | RefSeq:AT1G53270-TAIR-G | EnsemblPlants:AT1G53270.1 | TAIR:AT1G53270.1 | Unigene:At.66897 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | RefSeq:NP_175734.1 | ProteinID:OAP15496.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 |
| PO:PO:0009005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF441 | UniProt:Q9MAH4 |
| SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI00000A84BB | SEG:seg | : |
Description
ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
Coordinates
chr1:+:19862821..19864650
Molecular Weight (calculated)
66208.2 Da
IEP (calculated)
9.832
GRAVY (calculated)
0.116
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.