Factsheet for AT5G19410.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002234.1-P	Field mustard	cytosol	68.09	89.79
CDY13996	Canola	plasma membrane	67.46	89.14
CDX92533	Canola	plastid	86.57	87.12
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.45	65.07
KRH50602	Soybean	plastid	65.88	63.66
KRG89682	Soybean	cytosol, nucleus, peroxisome	65.56	63.26
PGSC0003DMT400062852	Potato	plastid	65.24	62.48
Solyc03g113690.1.1	Tomato	plastid	63.82	61.4
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	55.77	60.34
HORVU1Hr1G056890.2	Barley	cytosol	55.29	53.44
TraesCS1D01G240600.1	Wheat	plasma membrane	54.98	53.29
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	54.98	53.29
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	54.66	52.91
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	54.19	49.42
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	53.55	48.57
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	50.71	47.56
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	40.6	43.63
AT4G25750.1	Thale cress	plasma membrane	38.7	42.46
AT1G53270.1	Thale cress	plasma membrane	38.7	41.53
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	38.7	37.75
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	30.49	29.15
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	32.23	28.81
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	33.02	28.4
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	32.54	28.34
AT3G53510.1	Thale cress	plasma membrane	32.86	28.15
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	31.91	27.86
AT2G39350.1	Thale cress	cytosol	32.23	27.57
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	32.23	27.02
AT3G25620.2	Thale cress	cytosol, nucleus, plasma membrane, plastid	27.8	26.19
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	27.33	26.13
AT4G27420.1	Thale cress	cytosol, peroxisome, plasma membrane	25.12	24.92
AT1G31770.1	Thale cress	cytosol, nucleus, peroxisome	25.12	24.54
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	24.49	22.63
AT5G06530.1	Thale cress	plasma membrane	26.38	22.24
AT2G01320.3	Thale cress	peroxisome, plastid, vacuole	23.85	20.74

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:832061	UniProt:A0A1P8BFZ4	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AED92702.1	EMBL:AF296837	ProteinID:ANM70520.1	ArrayExpress:AT5G19410
EnsemblPlantsGene:AT5G19410	RefSeq:AT5G19410	TAIR:AT5G19410	RefSeq:AT5G19410-TAIR-G	EnsemblPlants:AT5G19410.2	Unigene:At.65531
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
RefSeq:NP_001318598.1	RefSeq:NP_197442.2	ProteinID:OAO90080.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF158	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0008484CB5	SEG:seg	:	:	:

Description

ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]

Coordinates

chr5:-:6545222..6547177

Molecular Weight (calculated)

71007.2 Da

IEP (calculated)

7.210

GRAVY (calculated)

0.121

Length

633 amino acids

Sequence
(BLAST)

001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.