Factsheet for Zm00001d038068_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	90.63	90.11
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	76.51	81.32
TraesCS1D01G240600.1	Wheat	plasma membrane	76.22	81.01
HORVU1Hr1G056890.2	Barley	cytosol	76.37	80.92
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	75.94	80.58
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	71.04	73.04
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	51.15	60.68
Bra002234.1-P	Field mustard	cytosol	39.19	56.67
CDY13996	Canola	plasma membrane	38.9	56.37
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	50.86	56.3
AT5G19410.2	Thale cress	plastid	49.42	54.19
KRG89682	Soybean	cytosol, nucleus, peroxisome	51.15	54.12
CDX92533	Canola	plastid	48.85	53.9
KRH50602	Soybean	plastid	50.0	52.98
Solyc03g113690.1.1	Tomato	plastid	49.86	52.58
PGSC0003DMT400062852	Potato	plastid	49.86	52.34
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	34.58	47.34
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	39.05	44.5
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	38.04	42.72
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	15.85	40.0
Zm00001d026706_P005	Maize	plasma membrane	37.32	34.53
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	31.99	31.18
Zm00001d035553_P001	Maize	plasma membrane	31.84	30.95
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	30.84	28.8
Zm00001d004762_P001	Maize	plasma membrane	26.08	28.64
Zm00001d053049_P001	Maize	plasma membrane	25.65	27.99
Zm00001d042953_P001	Maize	plasma membrane	30.4	27.73
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	28.67	26.96
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	30.12	26.46
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	24.5	25.15
Zm00001d024497_P001	Maize	plastid	24.78	23.66
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	24.35	22.44
Zm00001d008512_P002	Maize	golgi, plasma membrane, vacuole	21.9	21.87
Zm00001d024075_P001	Maize	cytosol	26.66	20.74

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1D6M2Z1	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:AQK85550.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF158	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000222160C
EnsemblPlantsGene:Zm00001d038068	EnsemblPlants:Zm00001d038068_P001	EnsemblPlants:Zm00001d038068_T001	SEG:seg	:	:

Description

ATPase%2C coupled to transmembrane movement of substance

Coordinates

chr6:-:146842279..146844363

Molecular Weight (calculated)

74940.7 Da

IEP (calculated)

8.091

GRAVY (calculated)

0.229

Length

694 amino acids

Sequence
(BLAST)

001: MEDDEISELY LLSRFAPSSS TTHQQRLAEM PMDQDLSSEL DPALVMSTST SSSSPPDSAA SPSSSFSLPS PPRYTFAVNN LSCPAPRRRA ANLLPSFLSY
101: SSSAAASPTP DAAGAAGLLK SVSFTASSSN ILAVVGPSGA GKSTLLRILS GRGTGSEIAK PGTVSLNGHA VTSRAQLRRL CGFVTQDDNL LPLLTVRETI
201: LFAARFRLRA AATAAERNER VEALMQELGL SDVADSYVGG GDGCGGPSAA RGVSGGERKR VSIAVDIVHN PPVLLLDEPT SGLDSRSALD VLQLLHDVSR
301: ARRQVVVLSI HQPSYRMLHY ISSLLLLSRG AVAHVGTLAS LEDALARLGH KIPMQLNPLE LAMEVTGQLE EDSSSRIAEH NADDEDEVSG LVSGRRLDVP
401: DQGYCSRFTE VATLTVRCWR TMYRTRELFA ARAAQAVVGG LGLGSVYFRL SPDSPDGVAL RLGLFAFTLS FLLSSTVEAL PILLHERRVL MREASRRAYR
501: LSSYVLANAL VFAPCLLAVS LLFSAPLYWL AGLRATPLAA FALFVLAVWL IMLMASSLVL FLSAVSPDFV LGNALICVFL GVFFLFSGYF IPKDNIPRYW
601: AFMYYVSMYR YPLDLLLINE YGGSARGRCV AWMGGKNDAM PGGVCLRTGA DVLRDRGIDE GMRWVNVGVM LGFFLLYRIL CWAVLVRRAS KTTL

Best Arabidopsis Sequence Match ( AT5G19410.2 )
(BLAST)

001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH

Arabidopsis Description

ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.