Factsheet for Zm00001d053049_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004762_P001	Maize	plasma membrane	89.94	90.51
KXG27901	Sorghum	plasma membrane, plastid	91.82	89.98
Os11t0177400-01	Rice	plasma membrane	64.15	86.26
TraesCS4D01G092000.1	Wheat	plasma membrane	81.45	79.94
HORVU4Hr1G018800.7	Barley	plastid	80.19	79.44
TraesCS4A01G216900.1	Wheat	plasma membrane, plastid	80.35	78.98
TraesCS4B01G095200.1	Wheat	plastid	79.87	78.88
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	62.26	61.4
GSMUA_Achr11P...	Banana	plasma membrane	58.49	61.39
PGSC0003DMT400002293	Potato	cytosol, peroxisome, plasma membrane	53.93	56.88
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	57.86	54.93
KRH34992	Soybean	cytosol, plasma membrane, plastid	57.39	54.56
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	24.84	54.48
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	57.86	54.28
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	56.45	54.07
Solyc11g018690.1.1	Tomato	cytosol	28.46	52.92
CDY36670	Canola	cytosol	30.19	52.89
CDX68292	Canola	cytosol, peroxisome, plasma membrane	53.93	52.77
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.77	52.62
CDX96366	Canola	cytosol	30.5	52.57
Bra007999.1-P	Field mustard	plasma membrane	54.09	52.2
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.25	52.19
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	53.62	51.51
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	54.72	50.88
CDX72849	Canola	cytosol, peroxisome, plasma membrane	54.25	50.59
CDY03668	Canola	plasma membrane	54.09	50.15
CDY36671	Canola	plasma membrane	26.57	48.84
CDX96365	Canola	plasma membrane	27.67	45.6
Zm00001d024497_P001	Maize	plastid	47.17	41.27
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	43.55	36.79
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	38.21	35.95
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	27.67	28.9
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	27.67	28.48
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	22.64	28.4
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	11.95	27.64
Zm00001d035553_P001	Maize	plasma membrane	30.03	26.75
Zm00001d008512_P002	Maize	golgi, plasma membrane, vacuole	29.09	26.62
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	29.25	26.12
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	27.99	25.65
Zm00001d026706_P005	Maize	plasma membrane	29.56	25.07
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	28.3	24.23
Zm00001d042953_P001	Maize	plasma membrane	28.93	24.18
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	28.14	22.66
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	25.31	21.82
Zm00001d024075_P001	Maize	cytosol	27.2	19.39

Protein Annotations

EntrezGene:100281598	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
ProteinID:AQK58612.1	UniProt:B6SWU8	EMBL:EU957213	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF225	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000182CF25
EnsemblPlantsGene:Zm00001d053049	EnsemblPlants:Zm00001d053049_P001	EnsemblPlants:Zm00001d053049_T001	SEG:seg	:	:

Description

ATPase%2C coupled to transmembrane movement of substance%3B ATPase%2C coupled to transmembrane movement of substances

Coordinates

chr4:-:210622232..210626878

Molecular Weight (calculated)

67210.9 Da

IEP (calculated)

9.445

GRAVY (calculated)

0.312

Length

636 amino acids

Sequence
(BLAST)

001: MPPNAEDVHG SGGGGALATT APAASKMDCF LTTVCTPLDL QFIDVSYRVK QTERSASKAP PGGRISHSGP GAPATAEERT ILKGITGEAR PGEVLAVLGP
101: SGSGKSTLLS ILGGRLAGRH SGTVLAGGRP PCRAVQRRTG FVAQDDVLHP HLTVRETLAF CAMLRLPRSA PASAKAAAAE AVIAELGLAA CADTVVGNAF
201: VRGVSGGERK RVSIGHELLV NPSLLVLDEP TSGLDSTAAA RLVATLSALA RKGRTVVLSV HQPSSRVYRM FDSVLLLAEG SCLYFGAGRD AMDYFASVGF
301: APGFHVNPAD FMLDLANGFA QADYNVVTAE GGNNVKQSLI SSYSKVLAPR VKASIDDAAG HAQNGGGEPL LLPPVGSGCT SWCNQFSVLL RRSLKERRHE
401: TFTSLRVVQI MAPALVAGAM WWRSSPLAVQ DRLGLLFFVS IFWGVFASFN AVFAFPQERP VLARERASGM YALSSYFMSR MAGDLPMELA LPTAFTVVVY
501: LMAALNPSPA AFALTLAVIL AYVLVAEGLG LAVGAAMMDA KRASTLVTVV MLAYLLTGGF YVHNVPGFMV WAKYTSFTYY CYRLLIAVQY GGHLKRLLPP
601: EAVDGEAGPG ACIAALVAMF FGYRLLAYLA LRRVRK

Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)

001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH

Arabidopsis Description

ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.