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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96366 Canola cytosol 76.58 75.34
Solyc11g018690.1.1 Tomato cytosol 55.1 58.48
Bra003903.1-P Field mustard cytosol, peroxisome, plasma membrane 87.05 48.62
CDX68292 Canola cytosol, peroxisome, plasma membrane 86.5 48.31
AT1G71960.1 Thale cress cytosol, peroxisome, plasma membrane 80.99 44.41
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 81.54 43.27
CDX72849 Canola cytosol, peroxisome, plasma membrane 80.99 43.11
CDY03668 Canola plasma membrane 79.89 42.27
PGSC0003DMT400002293 Potato cytosol, peroxisome, plasma membrane 55.37 33.33
KRG91794 Soybean cytosol, peroxisome, plasma membrane, plastid 59.78 32.39
KRH34992 Soybean cytosol, plasma membrane, plastid 59.23 32.14
VIT_18s0072g01220.t01 Wine grape cytosol, peroxisome, plasma membrane 57.02 31.17
GSMUA_Achr11P... Banana plasma membrane 51.79 31.02
GSMUA_Achr6P25480_001 Banana cytosol, peroxisome, plastid 54.27 30.54
Zm00001d053049_P001 Maize plasma membrane 52.89 30.19
Zm00001d004762_P001 Maize plasma membrane 51.79 29.75
HORVU4Hr1G018800.7 Barley plastid 51.52 29.13
KXG27901 Sorghum plasma membrane, plastid 51.52 28.81
TraesCS4D01G092000.1 Wheat plasma membrane 51.24 28.7
TraesCS4A01G216900.1 Wheat plasma membrane, plastid 50.96 28.59
TraesCS4B01G095200.1 Wheat plastid 50.41 28.42
GSMUA_Achr9P08630_001 Banana cytosol, peroxisome, plasma membrane 52.89 28.32
CDX92829 Canola plasma membrane 47.66 26.86
CDY29837 Canola plasma membrane 47.38 26.71
CDY50951 Canola cytosol, peroxisome, plastid 47.11 26.68
CDX89252 Canola cytosol, peroxisome, plasma membrane 46.83 26.65
CDY47690 Canola cytosol, peroxisome, plastid 46.83 26.52
CDY49155 Canola cytosol, peroxisome, plasma membrane 47.38 26.5
CDY29304 Canola cytosol, peroxisome, plasma membrane 46.56 26.49
Os11t0177400-01 Rice plasma membrane 33.61 25.79
CDY46506 Canola cytosol, peroxisome, plasma membrane 47.11 25.6
CDY50899 Canola cytosol 22.86 24.92
CDX99764 Canola cytosol, peroxisome, plasma membrane 46.83 24.82
CDY48079 Canola plastid 45.45 24.81
CDY51602 Canola plastid 45.45 24.77
CDY12299 Canola cytosol, peroxisome, plasma membrane 46.83 23.88
CDX76121 Canola cytosol 30.85 23.78
CDY24203 Canola peroxisome 41.87 22.32
CDY43362 Canola cytosol, peroxisome, plasma membrane 41.87 22.32
CDY04991 Canola plastid 42.98 21.73
CDX70095 Canola plastid 42.98 21.64
CDY14079 Canola plasma membrane 43.53 21.01
CDY23205 Canola plastid 42.42 20.95
CDX98933 Canola plasma membrane 43.53 20.93
CDX95330 Canola plastid 41.6 20.46
CDX93119 Canola cytosol, peroxisome, plasma membrane 29.75 17.85
CDX89610 Canola cytosol, peroxisome, plasma membrane 29.75 17.85
CDX92533 Canola plastid 30.85 17.81
CDY02907 Canola cytosol, peroxisome, plasma membrane 31.13 17.8
CDX76119 Canola cytosol, peroxisome, plasma membrane 31.41 17.09
CDY59400 Canola cytosol, plasma membrane, plastid 27.55 17.01
CDY02516 Canola cytosol, peroxisome, plasma membrane 27.55 17.01
CDX74853 Canola plastid 28.65 16.86
CDX96159 Canola plastid 27.0 16.64
CDX67624 Canola cytosol, peroxisome, plasma membrane 32.23 16.55
CDX69629 Canola plastid 33.06 16.48
CDY27043 Canola plastid 26.72 16.47
CDX94418 Canola plastid 25.62 16.23
CDY37656 Canola cytosol, peroxisome, plasma membrane 31.68 16.13
CDX89396 Canola plasma membrane 25.34 16.06
CDY65003 Canola cytosol, peroxisome, plasma membrane 31.41 15.97
CDY09810 Canola plastid 33.06 15.96
CDX73549 Canola cytosol, peroxisome, plasma membrane 33.06 15.87
CDY40201 Canola cytosol 30.85 15.82
CDX93388 Canola plasma membrane 31.96 15.65
CDY18451 Canola cytosol, peroxisome, plasma membrane 31.96 15.63
CDY12359 Canola cytosol, nucleus, plasma membrane 12.4 14.95
CDY37372 Canola cytosol, peroxisome, plasma membrane 30.03 14.87
CDY13996 Canola plasma membrane 19.56 14.82
CDY40385 Canola cytosol, peroxisome, plasma membrane 30.03 14.79
CDX73404 Canola plasma membrane 31.13 14.32
CDX96365 Canola plasma membrane 10.19 9.59
CDX76122 Canola plasma membrane 31.68 8.97
CDY02906 Canola plasma membrane 31.68 8.95
CDY36671 Canola plasma membrane 7.16 7.51
Solyc11g018680.1.1 Tomato golgi, mitochondrion, plasma membrane, plastid 3.31 4.14
CDY44641 Canola plasma membrane 1.1 1.35
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1GO:A0A078HE90UniProt:A0A078HE90InterPro:AAA+_ATPaseInterPro:ABC_transporter-like
EnsemblPlants:CDY36670ProteinID:CDY36670ProteinID:CDY36670.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00062432001InterPro:IPR003439
InterPro:P-loop_NTPasePFAM:PF00005PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF225SMART:SM00382
SUPFAM:SSF52540UniParc:UPI0004EE3FC6::::
Description
BnaCnng07720DBnaCnng07720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE90]
Coordinates
chrLK032381:+:90199..91648
Molecular Weight (calculated)
39380.9 Da
IEP (calculated)
9.693
GRAVY (calculated)
-0.121
Length
363 amino acids
Sequence
(BLAST)
001: MSGFDGVENQ INRPDSTAGL PQDPREPPIT LKFVDVGYRV KLHGDSSKIK KLLGLDHKPS DETRTTERTI LSGVTGMVSP GEFMAVLGPS GSGKSTLLNA
101: VAGRLHGPGL TGNILANDAK PTKQTLKRTG FVAQDDLLYP HLTVRETLIF VALLRLPRCL TRDDKIKAAE TVISELGLEK CENTVVGNTF IRGISGGERK
201: RVSIAHELLI NPSLLVLDEP TSGLDATAAL RLVQTLAGMA RGKGKTVVTS IHQPSSRAFQ MFDTVLLLSE GRCLFYGKGR DTMAYFDSVG FSPAFPMNPA
301: DFLLDLANGQ KEFLNMKSSF GVLGGPPIRL DPKRVRACLS EILTEVLSVW TSTKPLRIGY KNY
Best Arabidopsis Sequence Match ( AT1G31770.1 )
(BLAST)
001: MPQNCIAPRP EEDGGVMVQG LPDMSDTQSK SVLAFPTITS QPGLQMSMYP ITLKFEEVVY KVKIEQTSQC MGSWKSKEKT ILNGITGMVC PGEFLAMLGP
101: SGSGKTTLLS ALGGRLSKTF SGKVMYNGQP FSGCIKRRTG FVAQDDVLYP HLTVWETLFF TALLRLPSSL TRDEKAEHVD RVIAELGLNR CTNSMIGGPL
201: FRGISGGEKK RVSIGQEMLI NPSLLLLDEP TSGLDSTTAH RIVTTIKRLA SGGRTVVTTI HQPSSRIYHM FDKVVLLSEG SPIYYGAASS AVEYFSSLGF
301: STSLTVNPAD LLLDLANGIP PDTQKETSEQ EQKTVKETLV SAYEKNISTK LKAELCNAES HSYEYTKAAA KNLKSEQWCT TWWYQFTVLL QRGVRERRFE
401: SFNKLRIFQV ISVAFLGGLL WWHTPKSHIQ DRTALLFFFS VFWGFYPLYN AVFTFPQEKR MLIKERSSGM YRLSSYFMAR NVGDLPLELA LPTAFVFIIY
501: WMGGLKPDPT TFILSLLVVL YSVLVAQGLG LAFGALLMNI KQATTLASVT TLVFLIAGGY YVQQIPPFIV WLKYLSYSYY CYKLLLGIQY TDDDYYECSK
601: GVWCRVGDFP AIKSMGLNNL WIDVFVMGVM LVGYRLMAYM ALHRVKLR
Arabidopsis Description
ABCG14ABC transporter G family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W5]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.