CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013916.1-P	Field mustard	plastid	99.13	99.13
CDX94418	Canola	plastid	97.73	97.73
AT4G25750.1	Thale cress	plasma membrane	87.61	87.0
CDY27043	Canola	plastid	80.1	77.93
CDX96159	Canola	plastid	79.06	76.91
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	57.94	70.64
VIT_16s0050g01620.t01	Wine grape	cytosol	72.6	69.68
Solyc03g007690.1.1	Tomato	plastid	69.11	66.33
PGSC0003DMT400053843	Potato	cytosol, plasma membrane, plastid	68.76	66.11
KRG91599	Soybean	cytosol, plastid	65.1	65.32
GSMUA_Achr7P10690_001	Banana	cytosol	49.21	60.52
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	57.07	58.5
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	46.42	54.73
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	57.59	53.4
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	57.59	52.22
HORVU7Hr1G081250.1	Barley	mitochondrion	57.59	50.0
TraesCS7A01G342000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	57.59	49.85
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	57.42	49.7
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	57.07	49.4
CDY13996	Canola	plasma membrane	36.65	43.84
CDY02516	Canola	cytosol, peroxisome, plasma membrane	43.11	42.01
CDY59400	Canola	cytosol, plasma membrane, plastid	42.76	41.67
CDX89610	Canola	cytosol, peroxisome, plasma membrane	42.76	40.5
CDX93119	Canola	cytosol, peroxisome, plasma membrane	42.58	40.33
CDX92533	Canola	plastid	43.8	39.9
CDY02907	Canola	cytosol, peroxisome, plasma membrane	33.86	30.55
CDX76121	Canola	cytosol	24.78	30.15
CDX74853	Canola	plastid	31.76	29.5
CDY44641	Canola	plasma membrane	14.49	27.95
CDX76119	Canola	cytosol, peroxisome, plasma membrane	31.24	26.84
CDY40201	Canola	cytosol	33.16	26.84
CDX67624	Canola	cytosol, peroxisome, plasma membrane	32.81	26.59
CDX96366	Canola	cytosol	16.93	26.29
CDX69629	Canola	plastid	33.33	26.24
CDY65003	Canola	cytosol, peroxisome, plasma membrane	31.76	25.49
CDY09810	Canola	plastid	33.33	25.4
CDX73549	Canola	cytosol, peroxisome, plasma membrane	33.51	25.4
CDY37656	Canola	cytosol, peroxisome, plasma membrane	31.59	25.39
CDY36670	Canola	cytosol	16.06	25.34
CDY18451	Canola	cytosol, peroxisome, plasma membrane	32.29	24.93
CDX93388	Canola	plasma membrane	32.11	24.83
CDY29304	Canola	cytosol, peroxisome, plasma membrane	27.4	24.61
CDY12359	Canola	cytosol, nucleus, plasma membrane	12.91	24.58
CDX89252	Canola	cytosol, peroxisome, plasma membrane	27.23	24.45
CDY50951	Canola	cytosol, peroxisome, plastid	27.23	24.34
CDY47690	Canola	cytosol, peroxisome, plastid	27.23	24.34
CDX73404	Canola	plasma membrane	33.51	24.33
CDY49155	Canola	cytosol, peroxisome, plasma membrane	27.23	24.04
CDX92829	Canola	plasma membrane	26.88	23.91
CDY29837	Canola	plasma membrane	26.7	23.76
CDY50899	Canola	cytosol	13.79	23.72
CDY46506	Canola	cytosol, peroxisome, plasma membrane	27.57	23.65
CDY51602	Canola	plastid	26.88	23.12
CDX99764	Canola	cytosol, peroxisome, plasma membrane	27.57	23.07
CDY48079	Canola	plastid	26.53	22.86
CDX68292	Canola	cytosol, peroxisome, plasma membrane	25.65	22.62
CDX72849	Canola	cytosol, peroxisome, plasma membrane	26.53	22.29
CDY03668	Canola	plasma membrane	26.53	22.16
CDY12299	Canola	cytosol, peroxisome, plasma membrane	27.4	22.05
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	26.0	21.78
CDY24203	Canola	peroxisome	25.83	21.73
CDY43362	Canola	cytosol, peroxisome, plasma membrane	25.83	21.73
CDY04991	Canola	plastid	26.7	21.31
CDY23205	Canola	plastid	27.23	21.22
CDX70095	Canola	plastid	26.35	20.94
CDX95330	Canola	plastid	26.88	20.87
CDY14079	Canola	plasma membrane	26.88	20.48
CDX98933	Canola	plasma membrane	26.7	20.26
CDY37372	Canola	cytosol, peroxisome, plasma membrane	25.13	19.65
CDY40385	Canola	cytosol, peroxisome, plasma membrane	25.13	19.54
CDY36671	Canola	plasma membrane	10.65	17.63
CDX96365	Canola	plasma membrane	11.69	17.36
CDY02906	Canola	plasma membrane	34.03	15.18
CDX76122	Canola	plasma membrane	33.86	15.13

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078DJL3	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDX89396	ProteinID:CDX89396	ProteinID:CDX89396.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00149631001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF290	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0004EECBF4	SEG:seg	:	:	:

Description

BnaA01g14970D

Coordinates

chrLK031858:+:1412257..1413978

Molecular Weight (calculated)

63975.6 Da

IEP (calculated)

9.470

GRAVY (calculated)

0.387

Length

573 amino acids

Sequence
(BLAST)

001: MESNTLTTSS ISYTKPLPPL FPTAEPPSYI LRNISLTSHP SQILAIVGPS GAGKSTLLDI LAARTSPTSG SILVNSLPIN PSSYRKISSY VPQHDAFFPL
101: LTVSETFTFS ASLLLSKSPS ETSNAVASLL QELNLTHLAH TRLGQGLSGG ELRRVSIGLS LLHDPGFLLL DEPTSGLDSK SAFDVVQILK SVATSRKRTV
201: ILSIHQPSFK ILFLIDRLLL LSKGSVVYHG RLDLLEGFLQ SKGFTVPPQL NSLEYAMEIL QNLHDPYENA DIVLPDPQEP QKQNTKQIYR SSRITEVTLL
301: SRRFWKIIYR TRQLLLTNIL EALIVGLVLG TIYLNIGTGK AGIEKRFGLF AFTLTFLLSS TTQTLPIFID ERPILLRETS SGLYRLSSHI LANTLVFLPY
401: LLLIAIIYSV SLYFLVGLCL SWQAFAYFVL VIWIIVLMAN SFVLFLSSLA PNYIAGTSLV TVLLAAFFLF SGYFISKESL PKYWLFMYFF SMYKYALDSL
501: LINEYSCLAN KCLVWFGEGD VKGCLLTGGD VLDKKGLDER QRWTNVYVLL GFFVLYRLLC FLVLLKRVSS SRR

Best Arabidopsis Sequence Match ( AT4G25750.1 )
(BLAST)

001: MESYTLSTSS ISYAKPLSPL LLTAEQPSFI LRNITLTSHP SQILAIIGPS GAGKSTLLDI LAARTSPTSG SILLNSVLIN PSSYRKISSY VPQHDTFFPL
101: LTVSETFTFS ASLLLPKNLS KVSSVVASLL KELNLTHLAH TRLGQGLSGG ERRRVSIGLS LLHDPEVLLL DEPTSGLDSK SAFDVVQILK SIATSRERIV
201: ILSIHQPSFK ILSLIDRVLL LSKGTIVYHG RLDLLEAFLL SKGFTVPSQL NSLEYAMEIL QNIRDPYENA NIALPDHCPE SKKQNQKQSI VRYKSSRITE
301: ISLLSSRFWK IIYRTRQLLL TNILESLVVG LVLGTIYLNI GTGKEGIRKR FGLFAFTLTF LLSSTTQTLP IFIDERPILL RETSSGLYRL SSHILANTLV
401: FLPYLLLIAI IYSVSLYFLV GLCFSWQALA YFVLVIWIIV LMANSFVLFL SSLAPNYIAG TSSVTILLAA FFLFSGYFIS KESLPKYWLF MYFFSMYKYA
501: LDALLINEYS CLHNKCLVWF EEASVNSCLV TGGDVLDKNG LHERQRWFNV YMLLGFFVLY RVLCFLVLLK RVSGSKR

Arabidopsis Description

ABCG4ABC transporter G family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW08]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.