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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • cytosol 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009203.1-P Field mustard plasma membrane 99.86 95.36
CDY04991 Canola plastid 94.17 94.57
CDX98933 Canola plasma membrane 98.75 94.3
CDY14079 Canola plasma membrane 93.9 90.03
AT5G06530.1 Thale cress plasma membrane 93.07 89.35
VIT_08s0032g00790.t01 Wine grape plastid 78.64 75.8
Solyc01g006720.2.1 Tomato plastid 75.59 75.28
PGSC0003DMT400054994 Potato plastid 75.59 75.07
GSMUA_Achr8P04700_001 Banana cytosol, peroxisome, plasma membrane, plastid 71.43 69.22
CDY23205 Canola plastid 69.07 67.76
TraesCS4D01G271500.1 Wheat plastid 70.04 67.15
CDX95330 Canola plastid 68.52 66.94
TraesCS4B01G272400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 70.04 66.45
TraesCS4A01G032900.1 Wheat plastid 70.18 66.4
HORVU4Hr1G072620.1 Barley plastid 69.63 66.31
Os03t0157400-01 Rice cytosol, peroxisome, plasma membrane 70.18 65.63
EER92832 Sorghum plasma membrane 69.35 65.53
Zm00001d027723_P002 Maize cytosol, nucleus, plasma membrane 68.38 65.47
GSMUA_Achr6P23160_001 Banana plastid 66.02 64.76
GSMUA_Achr1P04620_001 Banana cytosol, peroxisome, plasma membrane, plastid 63.8 64.34
CDX92829 Canola plasma membrane 41.89 46.89
CDY49155 Canola cytosol, peroxisome, plasma membrane 42.16 46.84
CDY50951 Canola cytosol, peroxisome, plastid 41.61 46.8
CDY47690 Canola cytosol, peroxisome, plastid 41.61 46.8
CDY29837 Canola plasma membrane 41.75 46.74
CDX89252 Canola cytosol, peroxisome, plasma membrane 41.05 46.4
CDY29304 Canola cytosol, peroxisome, plasma membrane 40.78 46.08
CDY46506 Canola cytosol, peroxisome, plasma membrane 40.36 43.56
CDY51602 Canola plastid 40.22 43.54
CDY48079 Canola plastid 39.67 43.01
CDY36670 Canola cytosol 21.64 42.98
CDX68292 Canola cytosol, peroxisome, plasma membrane 38.7 42.92
CDY43362 Canola cytosol, peroxisome, plasma membrane 40.5 42.88
CDY24203 Canola peroxisome 40.36 42.73
CDX99764 Canola cytosol, peroxisome, plasma membrane 40.22 42.34
CDY12299 Canola cytosol, peroxisome, plasma membrane 41.75 42.28
CDX96366 Canola cytosol 21.5 42.01
CDX72849 Canola cytosol, peroxisome, plasma membrane 39.25 41.5
CDY03668 Canola plasma membrane 38.42 40.38
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 38.28 40.35
CDY12359 Canola cytosol, nucleus, plasma membrane 16.78 40.2
CDY36671 Canola plasma membrane 18.45 38.44
CDX96365 Canola plasma membrane 20.11 37.56
CDX76121 Canola cytosol 21.5 32.91
CDX89610 Canola cytosol, peroxisome, plasma membrane 24.83 29.59
CDX93119 Canola cytosol, peroxisome, plasma membrane 24.55 29.26
CDY02907 Canola cytosol, peroxisome, plasma membrane 25.52 28.98
CDY50899 Canola cytosol 13.31 28.83
CDY59400 Canola cytosol, plasma membrane, plastid 22.75 27.89
CDY02516 Canola cytosol, peroxisome, plasma membrane 22.61 27.72
CDX74853 Canola plastid 23.72 27.71
CDX94418 Canola plastid 21.36 26.88
CDY13996 Canola plasma membrane 17.75 26.72
CDX69629 Canola plastid 26.77 26.51
CDX89396 Canola plasma membrane 20.94 26.35
CDX76119 Canola cytosol, peroxisome, plasma membrane 24.27 26.24
CDX92533 Canola plastid 22.88 26.23
CDX67624 Canola cytosol, peroxisome, plasma membrane 25.66 26.17
CDX93388 Canola plasma membrane 26.77 26.05
CDY37656 Canola cytosol, peroxisome, plasma membrane 25.66 25.95
CDY40201 Canola cytosol 25.38 25.85
CDY27043 Canola plastid 21.08 25.81
CDY09810 Canola plastid 26.91 25.8
CDY65003 Canola cytosol, peroxisome, plasma membrane 25.52 25.77
CDY18451 Canola cytosol, peroxisome, plasma membrane 26.21 25.47
CDX96159 Canola plastid 20.8 25.47
CDX73549 Canola cytosol, peroxisome, plasma membrane 26.49 25.26
CDX73404 Canola plasma membrane 25.38 23.19
CDY40385 Canola cytosol, peroxisome, plasma membrane 23.58 23.07
CDY37372 Canola cytosol, peroxisome, plasma membrane 23.44 23.06
CDY44641 Canola plasma membrane 8.04 19.53
CDY02906 Canola plasma membrane 27.18 15.25
CDX76122 Canola plasma membrane 27.05 15.21
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078BZF5InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX70095ProteinID:CDX70095ProteinID:CDX70095.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00136203001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF286SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EEBE1DSEG:seg:::
Description
BnaA10g24440D
Coordinates
chrLK031790:+:3071093..3076090
Molecular Weight (calculated)
79842.2 Da
IEP (calculated)
9.775
GRAVY (calculated)
0.018
Length
721 amino acids
Sequence
(BLAST)
001: MDANGVPATA PASIGGGRET LSRKSSRRLM MSASPGRSGG AGTHIRKSRS AQLKLELEEV SSGAALSRAS SASLGLSFSF TGFAMPPEEI SDSKPFSDDE
101: MIPEDNEAGN KKPRFQAEPT LPIFLKFKEV TYKVSIRKLM TSAPVDKEIL SGINGSVSPG EVLALMGPSG SGKTTLLSLL GGRISQSASG GSVTYNDKPY
201: SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKEQRAIE VIQELGLERC QDTMIGGAFV RGVSGGERKR VSIGNEIIIN PSLLLLDEPT
301: SGLDSTTALR TIQMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGN LLYFGKSSEA LVYFSSIGCS PLITMNPAEF LLDLANGNIN DISVPSELED
401: RVQVGNSGRE PQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LSDPVPLDEE AKAKVLRLKR QWGASWWEQY CILFSRGLKE RRHEYFSWLR VTQVLSTAVI
501: LGLLWWQSDI RTPRGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS DLPLDFILPS LFLLVVYFMT GLRLSPYPFF
601: LSMLTVFLCI IASQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK LLLKVQYKDF AQSINGMRID NGLTEVVALV
701: AMIFGYRLLA YLSLRQMKIT T
Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)
001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T
Arabidopsis Description
ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.