CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93119	Canola	cytosol, peroxisome, plasma membrane	98.02	98.02
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	92.73	86.44
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.21	70.71
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	59.34	69.17
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	70.58	68.87
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	73.39	68.41
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	73.22	67.74
KRH64027	Soybean	extracellular	70.08	66.25
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	66.12	65.15
PGSC0003DMT400059944	Potato	cytosol, peroxisome, plasma membrane	68.43	64.59
GSMUA_Achr9P00310_001	Banana	cytosol	54.38	63.64
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	24.3	53.45
EES01897	Sorghum	cytosol, plasma membrane, plastid	55.37	49.78
TraesCS2A01G574700.1	Wheat	plasma membrane	52.89	49.23
TraesCS2D01G585300.1	Wheat	plasma membrane	54.71	49.11
TraesCS2B01G612200.1	Wheat	plasma membrane	54.71	49.04
HORVU2Hr1G124860.3	Barley	nucleus, peroxisome, plastid	44.79	48.92
CDY59400	Canola	cytosol, plasma membrane, plastid	46.45	47.79
CDY02516	Canola	cytosol, peroxisome, plasma membrane	45.95	47.28
CDY13996	Canola	plasma membrane	34.55	43.63
Zm00001d026706_P005	Maize	plasma membrane	53.72	43.33
CDX89396	Canola	plasma membrane	40.5	42.76
CDX94418	Canola	plastid	40.5	42.76
CDY27043	Canola	plastid	39.67	40.75
CDX96159	Canola	plastid	39.5	40.58
CDX92533	Canola	plastid	40.66	39.11
CDX74853	Canola	plastid	34.05	33.39
CDY02907	Canola	cytosol, peroxisome, plasma membrane	33.72	32.13
CDY44641	Canola	plasma membrane	15.7	31.99
CDX76121	Canola	cytosol	24.63	31.63
CDX69629	Canola	plastid	36.86	30.63
CDX76119	Canola	cytosol, peroxisome, plasma membrane	33.22	30.13
CDY36670	Canola	cytosol	17.85	29.75
CDY40201	Canola	cytosol	34.71	29.66
CDY09810	Canola	plastid	36.86	29.65
CDX67624	Canola	cytosol, peroxisome, plasma membrane	34.21	29.28
CDX96366	Canola	cytosol	17.69	29.0
CDY37656	Canola	cytosol, peroxisome, plasma membrane	33.72	28.61
CDY65003	Canola	cytosol, peroxisome, plasma membrane	33.72	28.57
CDY12359	Canola	cytosol, nucleus, plasma membrane	14.21	28.57
CDX93388	Canola	plasma membrane	34.38	28.07
CDY18451	Canola	cytosol, peroxisome, plasma membrane	34.38	28.03
CDX73549	Canola	cytosol, peroxisome, plasma membrane	34.71	27.78
CDY50899	Canola	cytosol	15.21	27.63
CDY48079	Canola	plastid	30.25	27.52
CDY51602	Canola	plastid	30.25	27.48
CDY29837	Canola	plasma membrane	29.09	27.33
CDX92829	Canola	plasma membrane	29.09	27.33
CDX73404	Canola	plasma membrane	35.04	26.87
CDY49155	Canola	cytosol, peroxisome, plasma membrane	28.76	26.81
CDY50951	Canola	cytosol, peroxisome, plastid	28.26	26.68
CDY47690	Canola	cytosol, peroxisome, plastid	28.26	26.68
CDY46506	Canola	cytosol, peroxisome, plasma membrane	29.42	26.65
CDY29304	Canola	cytosol, peroxisome, plasma membrane	28.1	26.65
CDX68292	Canola	cytosol, peroxisome, plasma membrane	28.59	26.62
CDX89252	Canola	cytosol, peroxisome, plasma membrane	27.77	26.33
CDX99764	Canola	cytosol, peroxisome, plasma membrane	29.26	25.84
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	28.59	25.29
CDY43362	Canola	cytosol, peroxisome, plasma membrane	28.43	25.26
CDY03668	Canola	plasma membrane	28.59	25.22
CDY24203	Canola	peroxisome	28.26	25.11
CDX72849	Canola	cytosol, peroxisome, plasma membrane	28.1	24.93
CDY23205	Canola	plastid	30.25	24.9
CDX70095	Canola	plastid	29.59	24.83
CDY04991	Canola	plastid	29.26	24.65
CDY12299	Canola	cytosol, peroxisome, plasma membrane	28.76	24.44
CDX95330	Canola	plastid	29.75	24.39
CDY14079	Canola	plasma membrane	29.75	23.94
CDX98933	Canola	plasma membrane	29.42	23.58
CDY37372	Canola	cytosol, peroxisome, plasma membrane	26.12	21.56
CDY40385	Canola	cytosol, peroxisome, plasma membrane	26.12	21.44
CDY36671	Canola	plasma membrane	11.4	19.94
CDX96365	Canola	plasma membrane	12.56	19.69
CDY02906	Canola	plasma membrane	36.03	16.96
CDX76122	Canola	plasma membrane	35.7	16.85

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078DKC2	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDX89610	ProteinID:CDX89610	ProteinID:CDX89610.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00149968001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF460	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0004EEAC45	SEG:seg	:	:	:

Description

BnaC03g45240D

Coordinates

chrLK031860:-:78496..80394

Molecular Weight (calculated)

68121.0 Da

IEP (calculated)

9.485

GRAVY (calculated)

0.213

Length

605 amino acids

Sequence
(BLAST)

001: MEKEGCEIEA LDIDYNITER KINVNPFGIF TRKPVLEADQ PVKLEDGTYK KVKHVLKGVT CRAKPWEILA IVGPSGAGKS SLLEILAGRL IPQTGSVIVN
101: QRPVDRANFK KISGYVTQKD TLFPLLTVEE TLLFSAKLRL KLPAEELKTR VKSLVRELGL EAVATARVGD DSLRGISGGE RRRVSIGVEA IHDPKVLILD
201: EPTSGLDSTS ALQIIDMLKL MAETRGRTIV LTIHQPGFRI VKLFNSVLLL ANGSTLNQGS VDQLGVYLRS NGLQHPLHEN IVEFAIESIE AITKHQRLQQ
301: SRRLVADVGT MKIGKEFTRD FANSRLGETM ILTHRFSKNI FRTKELFACR TVQMLGSGIV LGLIFHNLKD DLKGARERVG LFAFILTFLL TSTIEALPIF
401: LQEREILMKE TSSGSYRVSS YAVANGLVYL PFLLILAILF SVPVYWLVGL NPSFMAFLHF LLLIWLILYT ANSVVVCFSA LVPNFIVGNS VISGVMGSFF
501: LFSGYFISKN EIPGYWIFMH YISLFKYPFE GFLINEFSKS SKCLEYGFGK CLMTEEGLLK EERYGEENRW RNVVIMLCFV LLYRFVSYVI LRCRCSQRSF
601: KSTLV

Best Arabidopsis Sequence Match ( AT2G13610.1 )
(BLAST)

001: MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ
101: TGSVYVNKRP VDRANFKKIS GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV RGISGGERRR VSIGVEVIHD
201: PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT
301: KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG
401: SGIVLGLIFH NLKDDLKGAR ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL AILFSTPVYW LVGLNPSFMA
501: FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE
601: DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA

Arabidopsis Description

ABCG5ABC transporter G family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT6]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.