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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003903.1-P Field mustard cytosol, peroxisome, plasma membrane 99.08 99.08
CDY36671 Canola plasma membrane 51.54 96.82
CDY36670 Canola cytosol 48.31 86.5
CDX72849 Canola cytosol, peroxisome, plasma membrane 89.23 85.04
AT1G71960.1 Thale cress cytosol, peroxisome, plasma membrane 85.08 83.53
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 87.85 83.48
CDX96365 Canola plasma membrane 48.92 82.38
CDY03668 Canola plasma membrane 86.62 82.07
CDX96366 Canola cytosol 45.23 79.67
PGSC0003DMT400002293 Potato cytosol, peroxisome, plasma membrane 60.62 65.34
Solyc11g018680.1.1 Tomato golgi, mitochondrion, plasma membrane, plastid 28.77 64.48
VIT_18s0072g01220.t01 Wine grape cytosol, peroxisome, plasma membrane 62.77 61.45
Solyc11g018690.1.1 Tomato cytosol 32.0 60.82
KRG91794 Soybean cytosol, peroxisome, plasma membrane, plastid 62.62 60.75
KRH34992 Soybean cytosol, plasma membrane, plastid 62.31 60.54
Os11t0177400-01 Rice plasma membrane 41.69 57.29
GSMUA_Achr6P25480_001 Banana cytosol, peroxisome, plastid 56.62 57.05
GSMUA_Achr11P... Banana plasma membrane 52.62 56.44
Zm00001d053049_P001 Maize plasma membrane 52.77 53.93
Zm00001d004762_P001 Maize plasma membrane 52.0 53.48
TraesCS4D01G092000.1 Wheat plasma membrane 52.15 52.31
TraesCS4B01G095200.1 Wheat plastid 51.69 52.17
KXG27901 Sorghum plasma membrane, plastid 52.0 52.08
HORVU4Hr1G018800.7 Barley plastid 51.38 52.02
TraesCS4A01G216900.1 Wheat plasma membrane, plastid 51.54 51.78
GSMUA_Achr9P08630_001 Banana cytosol, peroxisome, plasma membrane 52.31 50.15
CDX92829 Canola plasma membrane 47.69 48.14
CDY29837 Canola plasma membrane 47.38 47.83
CDX89252 Canola cytosol, peroxisome, plasma membrane 46.62 47.49
CDY29304 Canola cytosol, peroxisome, plasma membrane 46.62 47.49
CDY50951 Canola cytosol, peroxisome, plastid 46.62 47.27
CDY47690 Canola cytosol, peroxisome, plastid 46.46 47.11
CDY49155 Canola cytosol, peroxisome, plasma membrane 46.0 46.07
CDY46506 Canola cytosol, peroxisome, plasma membrane 47.23 45.96
CDY48079 Canola plastid 46.15 45.11
CDY51602 Canola plastid 45.85 44.74
CDX99764 Canola cytosol, peroxisome, plasma membrane 46.77 44.38
CDY12299 Canola cytosol, peroxisome, plasma membrane 45.85 41.85
CDY12359 Canola cytosol, nucleus, plasma membrane 18.31 39.53
CDX70095 Canola plastid 42.92 38.7
CDY04991 Canola plastid 42.46 38.44
CDY23205 Canola plastid 42.62 37.69
CDX98933 Canola plasma membrane 43.23 37.22
CDY14079 Canola plasma membrane 42.77 36.97
CDX95330 Canola plastid 41.85 36.86
CDY24203 Canola peroxisome 37.69 35.98
CDY43362 Canola cytosol, peroxisome, plasma membrane 37.69 35.98
CDX76121 Canola cytosol 22.77 31.42
CDX74853 Canola plastid 27.23 28.69
CDX89610 Canola cytosol, peroxisome, plasma membrane 26.62 28.59
CDX93119 Canola cytosol, peroxisome, plasma membrane 26.62 28.59
CDY02907 Canola cytosol, peroxisome, plasma membrane 27.54 28.19
CDX92533 Canola plastid 26.62 27.5
CDY13996 Canola plasma membrane 20.15 27.35
CDY27043 Canola plastid 23.85 26.32
CDX69629 Canola plastid 29.38 26.24
CDY02516 Canola cytosol, peroxisome, plasma membrane 23.69 26.19
CDY59400 Canola cytosol, plasma membrane, plastid 23.54 26.02
CDX96159 Canola plastid 23.54 25.98
CDX67624 Canola cytosol, peroxisome, plasma membrane 28.0 25.74
CDX94418 Canola plastid 22.62 25.65
CDX89396 Canola plasma membrane 22.62 25.65
CDX76119 Canola cytosol, peroxisome, plasma membrane 26.31 25.64
CDY09810 Canola plastid 29.38 25.4
CDY37656 Canola cytosol, peroxisome, plasma membrane 27.69 25.25
CDY50899 Canola cytosol 12.92 25.23
CDX93388 Canola plasma membrane 28.62 25.1
CDY65003 Canola cytosol, peroxisome, plasma membrane 27.54 25.07
CDY40201 Canola cytosol 27.23 25.0
CDY18451 Canola cytosol, peroxisome, plasma membrane 28.46 24.93
CDX73549 Canola cytosol, peroxisome, plasma membrane 28.15 24.21
CDY37372 Canola cytosol, peroxisome, plasma membrane 26.62 23.6
CDY44641 Canola plasma membrane 10.77 23.57
CDY40385 Canola cytosol, peroxisome, plasma membrane 26.62 23.47
CDX73404 Canola plasma membrane 27.54 22.69
CDX76122 Canola plasma membrane 29.38 14.9
CDY02906 Canola plasma membrane 29.38 14.86
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078BVW1InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
EnsemblPlants:CDX68292ProteinID:CDX68292ProteinID:CDX68292.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787GO:GO:0016887
EnsemblPlantsGene:GSBRNA2T00099578001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061PFscan:PS50893
PANTHER:PTHR19241PANTHER:PTHR19241:SF225SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EEACC0
SEG:seg:::::
Description
BnaA07g23320D
Coordinates
chrLK031787:+:4825933..4834790
Molecular Weight (calculated)
71751.1 Da
IEP (calculated)
8.847
GRAVY (calculated)
0.244
Length
650 amino acids
Sequence
(BLAST)
001: MSGFGGVENL INVPDITACL PQDPREPRSL LPITLKFVDV CYRVKLHGDS SKIKKLLGLE HKPSDETRTT ERTILSGVTG MVSPGEFMAV LGPSGSGKST
101: LLNAVAGRLH GPGLTGSILA NDAKPTKQTL KRTGFVAQDD LLYPHLTVRE TLIFVALLRL PRSLTREDKI KAAESVISEL GLEKCENTVV GNTFIRGISG
201: GERKRVSIAH EVLINLSLLV LDEPTSGLDA TAALRLVQTL AGMAHGKGKT VVTSIHQPSS RAFQMFDTVL LLSEGRCLFY GKGRDAMAYF DSVGFSPAFP
301: MNPADFLLDL ANGVCQIDAA TEREKPNVRQ TLAVAYDTLL APNVKTYIDA TPSRENVRFL KTETNVRGIM SGFTTWFSQL CILLHRLIKE RRHESFDALR
401: VFQVVAASLL AGLMWWHSDF RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVIGSLS MELVLPAAFL TLTYWMVGLR
501: PGLVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGFYVNKVP SGMVWMKYVS TTFYCYRLMI AVQYGNGEEI LGMFGCELKR
601: TEGAARTDGC RFMEEEVVGD IELWTSVTVL FFMFVGYRML AYLALRRIKL
Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)
001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH
Arabidopsis Description
ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.