Factsheet for GSMUA_Achr6P25480_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	73.95	78.71
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	76.12	72.42
Os11t0177400-01	Rice	plasma membrane	47.44	64.69
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	28.68	63.79
PGSC0003DMT400002293	Potato	cytosol, peroxisome, plasma membrane	58.91	63.02
Zm00001d004762_P001	Maize	plasma membrane	61.24	62.5
Zm00001d053049_P001	Maize	plasma membrane	61.4	62.26
KXG27901	Sorghum	plasma membrane, plastid	61.71	61.33
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.33	60.54
HORVU4Hr1G018800.7	Barley	plastid	60.16	60.44
TraesCS4D01G092000.1	Wheat	plasma membrane	60.62	60.34
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	62.64	60.3
TraesCS4A01G216900.1	Wheat	plasma membrane, plastid	60.16	59.97
KRH34992	Soybean	cytosol, plasma membrane, plastid	62.17	59.94
TraesCS4B01G095200.1	Wheat	plastid	59.84	59.94
Solyc11g018690.1.1	Tomato	cytosol	30.85	58.19
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	58.14	56.65
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.05	56.62
CDX68292	Canola	cytosol, peroxisome, plasma membrane	57.05	56.62
Bra007999.1-P	Field mustard	plasma membrane	57.67	56.45
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.83	56.43
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	58.45	55.12
CDX72849	Canola	cytosol, peroxisome, plasma membrane	57.67	54.55
CDX96366	Canola	cytosol	31.16	54.47
CDY36671	Canola	plasma membrane	29.15	54.34
CDY36670	Canola	cytosol	30.54	54.27
CDY03668	Canola	plasma membrane	57.67	54.23
CDX96365	Canola	plasma membrane	30.54	51.04
GSMUA_Achr2P04580_001	Banana	plasma membrane	44.5	47.91
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	45.27	47.48
GSMUA_Achr2P02720_001	Banana	mitochondrion	41.86	45.38
GSMUA_Achr1P26950_001	Banana	plasma membrane	13.8	44.95
GSMUA_Achr8P34440_001	Banana	plasma membrane	38.45	43.59
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	48.06	41.61
GSMUA_Achr1P26960_001	Banana	cytosol	15.35	39.44
GSMUA_Achr6P23160_001	Banana	plastid	44.03	38.64
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	43.88	38.04
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	41.24	37.2
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	26.36	32.76
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	20.0	31.16
GSMUA_Achr9P00310_001	Banana	cytosol	24.5	30.56
GSMUA_Achr7P10690_001	Banana	cytosol	20.62	28.54
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	25.58	28.21
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	24.19	27.91
GSMUA_Achr10P...	Banana	plasma membrane	27.29	26.27
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	25.27	25.27
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	27.13	24.79
GSMUA_Achr5P28450_001	Banana	plasma membrane	26.2	24.21
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	23.26	23.62
GSMUA_Achr1P19280_001	Banana	plasma membrane	37.05	22.48
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	27.29	19.58
GSMUA_Achr6P08820_001	Banana	plasma membrane	27.29	14.24

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr6G25480_001	EnsemblPlants:GSMUA_Achr6P25480_001	EnsemblPlants:GSMUA_Achr6T25480_001
InterPro:IPR003439	UniProt:M0TA44	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF225	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000296E30D
SEG:seg	:	:	:	:	:

Description

ABC transporter G family member 25 [Source:GMGC_GENE;Acc:GSMUA_Achr6G25480_001]

Coordinates

chr6:+:26563867..26567893

Molecular Weight (calculated)

69958.2 Da

IEP (calculated)

9.593

GRAVY (calculated)

0.209

Length

645 amino acids

Sequence
(BLAST)

001: MPSDRDLEAG SHDNINGGVA TARVNSITSS ASCFPFTLKF MDVSYRLKLD PMSGSGGNGI RRILHSAGGS SAAPEERVIL NGISGMVSPG EMLAILGPSG
101: SGKSTLLSIL AGRLQGKHTG TVLANGHRLT KSVLRRTGFV TQDDVLYPHL TVRETLVFCA MLRLPRTVEK TDKVASAEAV IAELGLSKCA DTSVGGPFVR
201: GISGGERKRV CIGHEMLVNP SLLLLDEPTS GLDSTAASRL VATLGGLARQ GRTVVTSVHQ PASRVYQMFD SVLLLSEGSC LYFGKARDAV DYFGSVGFAP
301: KFHVNPADFM LDLANGVTQT DYQGDAEKSA VKQSLVSSYN SVLAPKVRAG LTAAVPRNAT HTGKDVCVER GRKEQRSISW CSQFSILLQR SLKERRHESF
401: NSLRVFQVMA AAVLSGSMWW HSSIRDVQDR LGLLFFITIF WGVFASFNAV FTFPQERAIF IKERSSGMYN LSSYFMARMA GDLPMELILP TVFTLILYWM
501: AGLRTEPGAF LLTLAVLLGY VLVAQGLGLV LGAAIMDAKQ ASTIATVTML AFLLTGGFYV QNIPSCLAWL KYISFTFYCY RLLIIIQYGG GQMDYLLASS
601: HHRNKRDADG ELVAQVSTSV CIAALLAMFV GYRVLAYMAL RRTKA

Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)

001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH

Arabidopsis Description

ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.