Factsheet for GSMUA_Achr9P27200_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g02200.t01	Wine grape	cytosol	71.63	65.53
HORVU5Hr1G060690.4	Barley	mitochondrion	72.25	64.28
KRH60557	Soybean	cytosol	74.42	60.08
KRH41868	Soybean	cytosol	73.33	59.57
TraesCS5B01G203200.1	Wheat	cytosol	78.6	58.21
PGSC0003DMT400050007	Potato	cytosol	74.57	57.81
Solyc01g097430.2.1	Tomato	cytosol, nucleus	74.57	57.4
TraesCS5D01G211000.1	Wheat	cytosol	78.29	57.39
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	77.21	56.78
Zm00001d024075_P001	Maize	cytosol	78.29	56.61
TraesCS5A01G205100.1	Wheat	mitochondrion	78.14	55.81
Os09t0401100-01	Rice	extracellular	75.35	55.61
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	48.37	49.13
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	40.62	37.11
GSMUA_Achr5P28450_001	Banana	plasma membrane	40.0	36.96
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	29.46	36.61
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	22.95	35.75
GSMUA_Achr9P00310_001	Banana	cytosol	27.6	34.43
GSMUA_Achr7P10690_001	Banana	cytosol	23.26	32.19
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	27.44	30.26
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	26.2	30.23
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	39.69	28.48
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	26.51	27.8
GSMUA_Achr8P34440_001	Banana	plasma membrane	23.57	26.71
GSMUA_Achr1P26960_001	Banana	cytosol	10.39	26.69
GSMUA_Achr2P02720_001	Banana	mitochondrion	24.03	26.05
GSMUA_Achr11P...	Banana	plasma membrane	24.34	25.91
GSMUA_Achr2P04580_001	Banana	plasma membrane	23.72	25.54
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	25.27	25.27
GSMUA_Achr6P23160_001	Banana	plastid	27.44	24.08
GSMUA_Achr10P...	Banana	plasma membrane	24.65	23.73
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	27.29	23.66
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	24.65	23.45
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	25.74	23.22
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	25.89	22.42
GSMUA_Achr6P08820_001	Banana	plasma membrane	40.78	21.28
GSMUA_Achr1P26950_001	Banana	plasma membrane	6.36	20.71
GSMUA_Achr1P19280_001	Banana	plasma membrane	26.05	15.8

Protein Annotations

MapMan:24.1.3.2.2	MapMan:26.9.4.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr9G27200_001
EnsemblPlants:GSMUA_Achr9P27200_001	EnsemblPlants:GSMUA_Achr9T27200_001	InterPro:IPR003439	UniProt:M0U3X7	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000295A324	SEG:seg	:	:

Description

Putative ABC transporter G family member 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G27200_001]

Coordinates

chr9:-:31446324..31449011

Molecular Weight (calculated)

73007.9 Da

IEP (calculated)

9.680

GRAVY (calculated)

0.100

Length

645 amino acids

Sequence
(BLAST)

001: MDHLRRTDTN RSLESLLDQE HPAANRELAP PQMVVYPGHG LEFQNLSYSI MKQQKKGGVW IKNEAYLLND LSGQALRGQV TAILGPSGAG KSTFLDALAG
101: RIARGSLEGS VSIDGRPVTT SYMKRVSSYV MQDDQLFPML TVVETLTFAA ELRLPPSVSK SEKRKRVWEL LDQLGLQTAA HTYIGDEGRR GVSGGERRRV
201: SIGVDIIHKP SLLFLDEPTS GLDSSSAYSV VEKVKKIAKE GSIVLMTIHQ PSFRIQMLLD RIIVLARGRL IYLGNPTALP EHLSGFGRQV PEGENSIEHL
301: LDVIKETRIP KTPKTPRTPF HKSTTRIPPR ITLHSAQTPF GSGGSNPRLA SHFYKDFSVW LTPVFITEYA NPWIREVLVL SHRNALNVVR TPELFLSREI
401: VLTVMAVILS TLFHRLNGDD FTTINRLLNF YIFAVCLVFF SSNDAVPTFI QERFIFIRET SYNAYRASSY VVSTLLVYLP FFAAQGFTFA IITKLMLRLK
501: SSLLYFWIIL YASLITTNAY VMLVSALVPS YITGYAVVIA TTALFFLMCG FFLKQSRIPV YWRWLHYISA IKYPFEALLT NEFKGDRCYS GSFIDCPLIG
601: EDVLSTMDIH FENVWADVAI LLAWGVLYRF FFYVVLRFYS KNERK

Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)

001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK

Arabidopsis Description

ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.