Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G060690.4 | Barley | mitochondrion | 81.63 | 98.07 |
| TraesCS5D01G211000.1 | Wheat | cytosol | 98.62 | 97.61 |
| TraesCS5A01G205100.1 | Wheat | mitochondrion | 97.01 | 93.58 |
| OQU80214 | Sorghum | cytosol, mitochondrion, peroxisome, plasma membrane | 82.09 | 81.53 |
| Zm00001d024075_P001 | Maize | cytosol | 83.24 | 81.28 |
| GSMUA_Achr9P27200_001 | Banana | cytosol, peroxisome, plasma membrane | 58.21 | 78.6 |
| Os09t0401100-01 | Rice | extracellular | 77.73 | 77.46 |
| VIT_17s0000g02200.t01 | Wine grape | cytosol | 58.21 | 71.91 |
| KRH60557 | Soybean | cytosol | 63.95 | 69.71 |
| KRH41868 | Soybean | cytosol | 63.03 | 69.14 |
| PGSC0003DMT400050007 | Potato | cytosol | 63.61 | 66.59 |
| Solyc01g097430.2.1 | Tomato | cytosol, nucleus | 63.61 | 66.11 |
| TraesCS3B01G285600.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.84 | 48.6 |
| TraesCS5B01G087400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 31.8 | 40.68 |
| TraesCS1B01G066000.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.38 | 40.63 |
| TraesCS3B01G047600.1 | Wheat | cytosol, peroxisome, vacuole | 31.23 | 40.3 |
| TraesCS3B01G387500.1 | Wheat | plastid | 32.49 | 37.38 |
| TraesCS4B01G200600.1 | Wheat | cytosol, peroxisome, plasma membrane | 31.8 | 34.97 |
| TraesCS3B01G251300.1 | Wheat | plastid | 23.88 | 34.38 |
| TraesCS1B01G252600.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 21.47 | 28.64 |
| TraesCS2B01G612200.1 | Wheat | plasma membrane | 21.7 | 28.0 |
| TraesCS7B01G240900.1 | Wheat | cytosol, peroxisome, plasma membrane | 19.98 | 26.28 |
| TraesCS4B01G095200.1 | Wheat | plastid | 18.94 | 25.62 |
| TraesCS7B01G280300.2 | Wheat | cytosol, peroxisome, plasma membrane | 20.32 | 25.54 |
| TraesCS3B01G017100.1 | Wheat | extracellular, plasma membrane, vacuole | 19.4 | 25.45 |
| TraesCS4B01G272400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 21.7 | 24.87 |
Protein Annotations
| MapMan:26.9.4.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF01061 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF180 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G203200 | EnsemblPlants:TraesCS5B01G203200.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:+:369612447..369616325
Molecular Weight (calculated)
98142.9 Da
IEP (calculated)
9.543
GRAVY (calculated)
-0.239
Length
871 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQPQPQHQH QHRTAMRRDG ERDHRRAAAE RPAAHRTERE AADETAHRRA AEAPPRRTER AGETAATARR AAEMPARRTE RKKSLESLLD AADVRGKRGG
101: PVPAGEKITT FPGQGLEFKN LSYSVIKKQK KDGVKIKKEV YLLNDISGQA LRGQVTAILG PSGAGKSTFL DAIAGRIAKG SLEGSVSIDG RPVTTSYMKQ
201: ISSYVMQDDQ LFPMLTVLET LTFAAEVRLP PSLSRAEKLK RVWELIEQLG LQTTAHTYIG DEGVRGVSGG ERRRVSIGTD IIHKPSLLFL DEPTSGLDST
301: SAYSVVEKVK DIAKGGSIVL MTIHQPSFRI QMLLDRIVIL ARGRLIYLGN PTTLPTYLAG FGRPVPEGEN SMEYLLDVIK EYDESTLGLE PLVAYQRDGS
401: KPTEAAKTPV PRTPRTPYHK SVQFRQMQLK SNQFSLASAT PHANPFSNFE SYNIDDEEGD FDNSLERKIQ TPMHTANSGY HPRLASQFYK DFSVWVYNGV
501: AGTPQRRPTW TPARTPARTP MSSYQRSRVN TPHRSIPPSP QEPVFKPEEP DYEEQELDIE PLDAPEDGPK FANPWLREVA VLSWRTALNV VRTPELFLSR
601: EIVLTVMALI LSTLFHRLSG SDFLTINRIL NFYIFAVCLV FFSSNDAVPT FIQERFIFIR ERSHNAYRAS TYVISSLIVY LPFFAIQGFT FAVITKFMLH
701: LNSSLLYFWI VLFASLITTN AYVMLVSALV PSYITGYAVV IATTALFFLT CGFFLKRNKI PIYWRWLHYI SAIKYPFEAL LVNEFKGSHC YTGTQNQLSP
801: GPLGEIKYSG LHDQLNPNIT TCPLIGQDVL TSMDITMDSI WVDVAILLAW GVLYRLFFYV VLRFYSKNER K
101: PVPAGEKITT FPGQGLEFKN LSYSVIKKQK KDGVKIKKEV YLLNDISGQA LRGQVTAILG PSGAGKSTFL DAIAGRIAKG SLEGSVSIDG RPVTTSYMKQ
201: ISSYVMQDDQ LFPMLTVLET LTFAAEVRLP PSLSRAEKLK RVWELIEQLG LQTTAHTYIG DEGVRGVSGG ERRRVSIGTD IIHKPSLLFL DEPTSGLDST
301: SAYSVVEKVK DIAKGGSIVL MTIHQPSFRI QMLLDRIVIL ARGRLIYLGN PTTLPTYLAG FGRPVPEGEN SMEYLLDVIK EYDESTLGLE PLVAYQRDGS
401: KPTEAAKTPV PRTPRTPYHK SVQFRQMQLK SNQFSLASAT PHANPFSNFE SYNIDDEEGD FDNSLERKIQ TPMHTANSGY HPRLASQFYK DFSVWVYNGV
501: AGTPQRRPTW TPARTPARTP MSSYQRSRVN TPHRSIPPSP QEPVFKPEEP DYEEQELDIE PLDAPEDGPK FANPWLREVA VLSWRTALNV VRTPELFLSR
601: EIVLTVMALI LSTLFHRLSG SDFLTINRIL NFYIFAVCLV FFSSNDAVPT FIQERFIFIR ERSHNAYRAS TYVISSLIVY LPFFAIQGFT FAVITKFMLH
701: LNSSLLYFWI VLFASLITTN AYVMLVSALV PSYITGYAVV IATTALFFLT CGFFLKRNKI PIYWRWLHYI SAIKYPFEAL LVNEFKGSHC YTGTQNQLSP
801: GPLGEIKYSG LHDQLNPNIT TCPLIGQDVL TSMDITMDSI WVDVAILLAW GVLYRLFFYV VLRFYSKNER K
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.