CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024075_P001	Maize	cytosol	92.25	90.7
HORVU5Hr1G060690.4	Barley	mitochondrion	72.75	88.0
TraesCS5B01G203200.1	Wheat	cytosol	81.53	82.09
TraesCS5D01G211000.1	Wheat	cytosol	81.53	81.25
TraesCS5A01G205100.1	Wheat	mitochondrion	81.3	78.96
Os09t0401100-01	Rice	extracellular	77.08	77.35
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	56.78	77.21
VIT_17s0000g02200.t01	Wine grape	cytosol	57.81	71.91
KRH60557	Soybean	cytosol	62.71	68.84
KRH41868	Soybean	cytosol	61.8	68.26
PGSC0003DMT400050007	Potato	cytosol	62.83	66.23
Solyc01g097430.2.1	Tomato	cytosol, nucleus	62.71	65.63
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	40.25	48.22
EES17614	Sorghum	cytosol, peroxisome, vacuole	31.58	39.01
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	31.47	38.66
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	32.04	37.72
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	32.5	35.8
EES03276	Sorghum	mitochondrion	22.69	32.52
EES01897	Sorghum	cytosol, plasma membrane, plastid	22.35	29.12
OQU76682	Sorghum	mitochondrion, plasma membrane	19.5	28.74
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	20.41	28.32
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	20.41	26.92
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	20.3	26.85
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	20.3	26.85
KXG27901	Sorghum	plasma membrane, plastid	19.61	26.5
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	20.75	26.07
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	18.81	24.85
EER92832	Sorghum	plasma membrane	20.98	24.12
EES13415	Sorghum	plastid	20.18	23.63

Protein Annotations

MapMan:26.9.4.1	Gene3D:3.40.50.300	UniProt:A0A1Z5R8W9	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
EnsemblPlants:OQU80214	ProteinID:OQU80214	ProteinID:OQU80214.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382	EnsemblPlantsGene:SORBI_3007G095100
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000B8BABA6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:17560153..17564153

Molecular Weight (calculated)

98172.7 Da

IEP (calculated)

9.155

GRAVY (calculated)

-0.205

Length

877 amino acids

Sequence
(BLAST)

001: MPVAGGHHRA ERAERPAGHR VERAEMQHAT HHHHATERAP GDARRTTTAA AAAEMPAWQT TERKKSLESL LGAAGDARGW QQQQQHHHHH HRAGGGDGGG
101: GHHVPVRPVP VPGEKVINFP GQGLEFKELS YSVIKKQKKD GVKVKKEVYL LNDISGQALR GQVTAILGPS GAGKSTFLDA LAGRIAKGSL EGSVSIDGRS
201: VTTSYMKQIS SYVMQDDQLF PMLTVLETLR FAAEVRLPPS LSRAEKLKRV WELIEQLGLQ TTAHTYIGDE GIRGVSGGER RRVSIGTDII HKPSLLFLDE
301: PTSGLDSTSA YSVVEKVKEI AKGGSIVLMT IHQPSFRIQM LLDRIVILAR GRLIYLGSPI TLPAHLAGFG RPVPDGENSI EYLLDVIKEY DESTLGLDPL
401: VAYQRDGSKP DEAAKTPIPK TPRTPHQKSV QFRQMQLKSN QFSAATGTPH ATNTFSNFES YNIDDEEEEF DNSLERKSHT PLHTGTSTYH PRLASQFYKD
501: FSVWVYHGVT GTPHRKPTWS TPARTPARTP MSSYHQRSRF ATPQHAPPPQ SPHEPVFKPE EPSYHEYQLE LEPLDAPEDG PKFANPWLRE VAVLSWRTAL
601: NVVRTPELFL SREIVLTVMA LILSTLFHRL SDSNFITINR LLNFYIFAVC LVFFSSNDAV PTFIQERFIF IRERSHNAYR ASSYVISSLI VYLPFFAIQG
701: FTFAVITKYM LHLHSNLVNF WIILFASLIT TNAYVMLVSA LVPSYITGYA VVIATTALFF ITCGFFLKRT KIPMAWRWLH YISAIKYPFE ALLVNEFKGD
801: HCYVGTQNQL SPGPLGQVSN LNATSTTCPL VGQDVLDTMD ISIDNIWIDV AILLAWGVLY RLIFYVVLRF YSKNERK

Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)

001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR

Arabidopsis Description

ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.