Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 95.35 96.08
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 87.94 88.38
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 87.81 87.81
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 87.81 83.12
Os03t0281900-01 Rice cytosol, plasma membrane 79.27 80.18
CDY44641 Canola plasma membrane 26.76 71.72
Bra005049.1-P Field mustard plasma membrane 26.63 71.38
Bra005051.1-P Field mustard plastid 54.9 71.17
CDX74853 Canola plastid 54.9 70.83
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 62.56 68.78
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 62.81 67.93
CDX69629 Canola plastid 61.93 67.72
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 61.68 67.63
HORVU4Hr1G058070.2 Barley cytosol 68.97 67.36
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 61.43 67.26
Solyc05g054890.2.1 Tomato cytosol 63.19 67.07
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 60.55 66.57
PGSC0003DMT400029838 Potato extracellular 58.04 66.47
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 59.92 66.43
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 62.31 66.4
KRH67592 Soybean plastid 61.18 66.35
AT2G39350.1 Thale cress cytosol 61.43 66.08
KRG92984 Soybean cytosol, peroxisome, plasma membrane 62.19 66.0
Solyc04g010210.1.1 Tomato extracellular 59.17 65.97
KRG95875 Soybean cytosol, peroxisome, plasma membrane 60.93 65.9
CDY09810 Canola plastid 62.06 65.69
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 60.68 65.62
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 60.55 64.78
AT3G53510.1 Thale cress plasma membrane 59.55 64.14
CDX93388 Canola plasma membrane 59.3 63.7
CDY18451 Canola cytosol, peroxisome, plasma membrane 59.17 63.48
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 59.05 63.34
Solyc09g005970.1.1 Tomato plasma membrane 58.67 63.28
PGSC0003DMT400061466 Potato plasma membrane 58.67 63.02
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 59.55 62.78
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 58.67 62.68
CDY02907 Canola cytosol, peroxisome, plasma membrane 49.5 62.05
EES18923 Sorghum cytosol, peroxisome, plasma membrane 55.53 61.9
CDX76121 Canola cytosol 36.43 61.57
CDX73549 Canola cytosol, peroxisome, plasma membrane 58.42 61.51
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 50.5 60.73
CDX76119 Canola cytosol, peroxisome, plasma membrane 50.63 60.42
EES17614 Sorghum cytosol, peroxisome, vacuole 53.77 60.28
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 53.39 60.03
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 52.64 59.94
CDX67624 Canola cytosol, peroxisome, plasma membrane 53.02 59.69
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 52.89 59.55
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 52.89 59.46
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 53.02 59.44
CDY40201 Canola cytosol 52.76 59.32
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 52.01 57.1
CDY37656 Canola cytosol, peroxisome, plasma membrane 51.01 56.94
CDY65003 Canola cytosol, peroxisome, plasma membrane 50.75 56.58
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 50.63 56.36
CDX73404 Canola plasma membrane 52.89 53.36
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 58.54 49.26
CDY50899 Canola cytosol 20.48 48.95
Bra014774.1-P Field mustard plasma membrane 37.56 47.24
CDX76122 Canola plasma membrane 61.06 37.91
Bra014776.1-P Field mustard cytosol 61.06 37.85
CDY02906 Canola plasma membrane 60.55 37.51
EES03493 Sorghum cytosol, peroxisome, plasma membrane 33.79 36.75
GSMUA_Achr6P08820_001 Banana plasma membrane 53.14 34.22
EES03276 Sorghum mitochondrion 25.5 33.17
OQU80214 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 35.8 32.5
EES14035 Sorghum cytosol, peroxisome, plasma membrane 25.63 32.28
EES01897 Sorghum cytosol, plasma membrane, plastid 26.0 30.76
KXG21900 Sorghum cytosol, peroxisome, plasma membrane 26.0 29.66
OQU76682 Sorghum mitochondrion, plasma membrane 21.48 28.74
KXG20331 Sorghum cytosol, peroxisome, plasma membrane 23.49 28.12
OQU76684 Sorghum nucleus, peroxisome, plasma membrane 23.12 27.75
OQU76683 Sorghum nucleus, peroxisome, plasma membrane 23.12 27.75
KXG27901 Sorghum plasma membrane, plastid 22.36 27.43
EES00402 Sorghum endoplasmic reticulum, golgi, plasma membrane 21.36 25.6
EER92832 Sorghum plasma membrane 24.0 25.03
EES13415 Sorghum plastid 22.74 24.17
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:8081460InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSUniProt:C5WP95EnsemblPlants:EER95064ProteinID:EER95064ProteinID:EER95064.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005618GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0006950GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009408GO:GO:0009628GO:GO:0009653
GO:GO:0009719GO:GO:0009733GO:GO:0009737GO:GO:0009739GO:GO:0009751GO:GO:0009753
GO:GO:0009987GO:GO:0010345GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0019748GO:GO:0030312GO:GO:0042626GO:GO:0048225GO:GO:0048226GO:GO:0055075
GO:GO:0055078GO:GO:0055085GO:GO:0071456GO:GO:0071470GO:GO:0071472GO:GO:1901002
GO:GO:1902074GO:GO:2000032InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382EnsemblPlantsGene:SORBI_3001G413700
SUPFAM:SSF52540unigene:Sbi.8705TMHMM:TMhelixUniParc:UPI0001A8305ARefSeq:XP_002468066.1SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:69564909..69568023
Molecular Weight (calculated)
88088.8 Da
IEP (calculated)
9.755
GRAVY (calculated)
0.007
Length
796 amino acids
Sequence
(BLAST)
001: MSRFVDKLPF FDRRSSPMEE AGDIPRNGLL HMHHHHQPHH SGLLMQPQPS PPAKQSSFTL AQLLKRVNEA RSDASSPTSS PTHSHYTIEL GGSVPGSTGS
101: DLSERMRGGD RDRGSDGTLL PFVLKFTDLT YSVKQRKKGP CLPALPFGRG GREPTEPEVP RMKTLLDNIS GEAREGEIMA VLGASGSGKS TLIDALANRI
201: VKESLHGSVT LNGESLDSNL LKVISAYVMQ DDLLYPMLTV EETLMFAAEF RLPRSLPTKE KKKRVQALID QLGLRNAANT IIGDEGHRGV SGGERRRVSI
301: GVDIIHDPIV LFLDEPTSGL DSTSAFMVVK VLQRIAQSGS VVVMSIHQPS YRILGLLDRL LFLSRGQTVY YGSPRALPSF FNDFGKPIPG NENPTEFALD
401: LIRELETMPQ GARDLVEHNK KWQTRMAPKA KHHDGHGEKP SLSLKEAISA SISRGKLVSG ATDGSVSVHS PGMLAAPAAP VSKFANPFWV EMGVLTRRAF
501: LSTKRTPEIF IIRLAAVMVT GFILATIFWR LDDSPKGVEE RLGFFAIAMS TMFYTCSDSL PVFLNERYIF LRETAYNAYR RSSYVLSHTI VGFPSLIVLS
601: FAFALTTFFA VGLAGGADGF FFFVAIVLAS FWAGSGFATF LSGVVTNVML GFPVVVSTLA YFLLFSGFFI NRDRIPKYWL WFHYLSLVKY PYEAVMQNEF
701: SDPTRCFVRG VQMFDNTPLA ALPGVLKVRV LRAMSQSLGV DIGTNTCITT GPDFLRQQAV TDLTKWDCLW ITVAWGFLFR ILFYISLLLG SRNKRR
Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.