Factsheet for GSMUA_Achr6P08820_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	35.44	62.04
Bra005049.1-P	Field mustard	plasma membrane	14.89	61.95
CDY44641	Canola	plasma membrane	14.81	61.62
GSMUA_Achr5P28450_001	Banana	plasma membrane	34.39	60.89
Bra005051.1-P	Field mustard	plastid	30.1	60.59
CDX74853	Canola	plastid	30.1	60.29
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	34.06	58.15
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	33.5	57.66
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	33.66	57.46
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	34.71	57.43
CDX69629	Canola	plastid	33.66	57.14
PGSC0003DMT400029838	Potato	extracellular	32.12	57.12
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	33.5	57.02
Solyc04g010210.1.1	Tomato	extracellular	32.93	57.0
KRH67592	Soybean	plastid	33.82	56.95
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	33.5	56.95
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	33.82	56.79
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	33.82	56.79
CDY02907	Canola	cytosol, peroxisome, plasma membrane	29.05	56.54
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	33.66	56.52
Solyc05g054890.2.1	Tomato	cytosol	34.14	56.27
AT3G53510.1	Thale cress	plasma membrane	33.58	56.16
AT2G39350.1	Thale cress	cytosol	33.5	55.95
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	33.82	55.73
CDX76121	Canola	cytosol	21.12	55.41
CDY09810	Canola	plastid	33.58	55.19
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	32.93	54.7
CDX93388	Canola	plasma membrane	32.52	54.25
CDY18451	Canola	cytosol, peroxisome, plasma membrane	32.36	53.91
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	34.39	53.8
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.28	53.77
CDX73549	Canola	cytosol, peroxisome, plasma membrane	32.69	53.44
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	28.56	53.32
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	34.06	53.16
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	34.22	53.14
Solyc09g005970.1.1	Tomato	plasma membrane	31.72	53.12
PGSC0003DMT400061466	Potato	plasma membrane	31.8	53.04
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	34.14	53.02
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	32.2	52.72
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	30.18	52.68
CDX76119	Canola	cytosol, peroxisome, plasma membrane	28.24	52.32
Os03t0281900-01	Rice	cytosol, plasma membrane	33.25	52.22
CDX67624	Canola	cytosol, peroxisome, plasma membrane	29.61	51.77
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.21	51.65
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.45	51.49
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.53	51.41
CDY40201	Canola	cytosol	29.29	51.13
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.29	51.13
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	29.85	50.9
CDY37656	Canola	cytosol, peroxisome, plasma membrane	28.96	50.21
CDY65003	Canola	cytosol, peroxisome, plasma membrane	28.96	50.14
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.96	50.07
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	34.06	50.06
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	35.52	48.83
CDY50899	Canola	cytosol	12.62	46.85
CDX73404	Canola	plasma membrane	29.69	46.51
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.93	43.02
Bra014774.1-P	Field mustard	plasma membrane	21.6	42.18
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	21.36	41.57
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	21.28	40.78
HORVU4Hr1G058070.2	Barley	cytosol	26.7	40.49
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	14.81	35.26
GSMUA_Achr7P10690_001	Banana	cytosol	13.11	34.76
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	11.16	33.33
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	15.61	32.99
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	14.81	32.74
GSMUA_Achr9P00310_001	Banana	cytosol	13.35	31.91
CDX76122	Canola	plasma membrane	33.09	31.9
Bra014776.1-P	Field mustard	cytosol	33.09	31.85
CDY02906	Canola	plasma membrane	33.09	31.83
GSMUA_Achr1P26960_001	Banana	cytosol	5.74	28.29
GSMUA_Achr8P34440_001	Banana	plasma membrane	12.7	27.59
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	14.24	27.29
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	13.51	27.15
GSMUA_Achr2P04580_001	Banana	plasma membrane	12.86	26.54
GSMUA_Achr11P...	Banana	plasma membrane	12.95	26.4
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	15.13	26.15
GSMUA_Achr2P02720_001	Banana	mitochondrion	12.54	26.05
GSMUA_Achr6P23160_001	Banana	plastid	15.05	25.31
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	15.05	25.0
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	13.67	24.93
GSMUA_Achr10P...	Banana	plasma membrane	12.86	23.73
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	13.35	22.15
GSMUA_Achr1P26950_001	Banana	plasma membrane	3.07	19.19
GSMUA_Achr1P19280_001	Banana	plasma membrane	13.51	15.71

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr6G08820_001
EnsemblPlants:GSMUA_Achr6P08820_001	EnsemblPlants:GSMUA_Achr6T08820_001	InterPro:IPR003439	UniProt:M0T5D1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF428	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002959745	SEG:seg	:	:

Description

ABC transporter G family member 16 [Source:GMGC_GENE;Acc:GSMUA_Achr6G08820_001]

Coordinates

chr6:-:5829827..5835461

Molecular Weight (calculated)

137152.0 Da

IEP (calculated)

8.808

GRAVY (calculated)

0.267

Length

1236 amino acids

Sequence
(BLAST)

0001: MAMTKEVNLT PFSSPSPLLG HQYCHHPLAT AAAVDPCHFV LSFTDLSYSV KEPRSFPFFR KKNNETRPEA LRGTRKLLDS ISGEVRTGEI LAVLGASGSG
0101: KTTLIDALAN RIERASLRGC ITLNGDRLEG RLLKAISAYV MQDDLMFPML TVEETLMFAA KFRIPRSTII GDEGHRGVSG GERRRVSIGT DIVHDPIILF
0201: LDEPTSGLDS TSAFMVVQVL QRIARSGSMV IMSVHQPSYR ILGLLDRLIF LSRGQTVYSG PPQGLPEFFA VFGNPIPDGG NPAEFALDLV RELEDTAPDG
0301: AKDLVTIATG KLVSGAMIDG AALASYANPF WVEVSALTKR AIINMWRMPE ILAFRLGDML VTGFLLATIF WRLRDTPKDV RERIGFFAIT MTTIFFTSGD
0401: TLAVFIQERY IYMRETAYNT YRRSSYVVAN AVTTFLPLVF LTIPLAFITF FGVGLSGGMD GLGFFFLTIL ATFWAGSGFV TFLSGILSHV VLGYTVAAAV
0501: ISYFLLLSGF FINRNRIPDY WIWLHYMSLV KYPYEAVMQN EFILTVIGQT LGMNITNDTC IITGSDVLQE QSINQLNKWS CLLVIVAWGF FFRLLFYISL
0601: LLGSRNKRKY LTLIEEYYKS KTHKFTVRII LLESMDCTND RSIRASTNST ERAPCLCNCS ADGGMGERAS RLFGSQPPAG RRVLLDSITG EVRTGEILAV
0701: LGASGSGKST FIDALADRIE RTSLQGSITL NGENLDSGLL KVISAYVMQD DLLFPMLTVE ETLMFAAELR LPRSFSASRK RERVQALVDQ LGLRSAAKTI
0801: IGDEGHRGVS GGERRRVSIG TDIIHDPVIL FLDEPTSGLD STSAFMVVKV LQKIARSGSI VVMSVHQPSY RILTLLDRLL FLCRGQTVYS GPPHDLPGFF
0901: RQFGRPIPEG ENATEFALDL ARELQDTNAG AAALVDFNRR ISVSHGRLVG SEVLVLSKRA FMNMRRMPEI FAIRLGTVLV SAFILGTIFW RLGESPKDVT
1001: ERLGFFAIGI TTVFFTCADA LPVFIQERYI FMRETAYNAY RRSSYVLSNA IVGIPALILL SVAFAASTFF AVGLAGGGEG LIFFFLIILA SFWAGSGFVT
1101: FLSGVLSHVV LGYTVAAAIL SYYLLFSGFF INRNRIPHYW IWFHYLSMLK YAYEGALQNE FGGESSKCFS RGVQIKTLQM NLTSDSCIVT GPDVLQQQSI
1201: NQLNKWECLL VTVGWGFLFR ILFYITLLLS SRNKRR

Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)

001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR

Arabidopsis Description

ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.