Factsheet for GSMUA_Achr1P26960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P34440_001	Banana	plasma membrane	57.37	25.31
GSMUA_Achr6P23160_001	Banana	plastid	69.32	23.67
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	66.93	22.58
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	58.57	20.56
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	43.43	17.72
GSMUA_Achr2P04580_001	Banana	plasma membrane	38.65	16.19
GSMUA_Achr11P...	Banana	plasma membrane	38.65	16.01
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	39.44	15.35
GSMUA_Achr2P02720_001	Banana	mitochondrion	35.06	14.79
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	41.43	13.96
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	37.05	13.72
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	28.69	11.34
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	25.9	11.11
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	24.7	11.09
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	26.69	10.39
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	29.08	10.34
GSMUA_Achr5P28450_001	Banana	plasma membrane	28.69	10.32
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	21.12	10.21
GSMUA_Achr10P...	Banana	plasma membrane	26.69	10.0
GSMUA_Achr1P19280_001	Banana	plasma membrane	39.84	9.41
GSMUA_Achr9P00310_001	Banana	cytosol	18.73	9.09
GSMUA_Achr7P10690_001	Banana	cytosol	15.14	8.15
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	29.08	8.12
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	13.15	7.97
GSMUA_Achr6P08820_001	Banana	plasma membrane	28.29	5.74
GSMUA_Achr1P26950_001	Banana	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr1P26960_001	EnsemblPlants:GSMUA_Achr1T26960_001	EnsemblPlantsGene:GSMUA_Achr1G26960_001	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:ABC_transporter-like
InterPro:IPR003439	InterPro:P-loop_NTPase	PANTHER:PTHR19241	PANTHER:PTHR19241:SF286	PFAM:PF00005	SEG:seg
SUPFAM:SSF52540	UniParc:UPI000296DA55	UniProt:M0S3F3	MapMan:35.1	:	:

Description

ABC transporter G family member 22 [Source:GMGC_GENE;Acc:GSMUA_Achr1G26960_001]

Coordinates

chr1:-:23296635..23298133

Molecular Weight (calculated)

27738.5 Da

IEP (calculated)

7.970

GRAVY (calculated)

-0.153

Length

251 amino acids

Sequence
(BLAST)

001: MTRQQKEERA LSAIHELGLE MCQDTIIGES FVRGVSGGER KRVCIGNEII INPLLFLDEP TAGLDSTTAL RIVQLLHTIA KTGKTVVTTI HQPSTRLFAD
101: KLILLGKGSL LYYGKASEAM DYFSSIGCSP LIAMNPAEFL LDLANGNISD TTIPSELEKK VQSKVWGATQ EMASHLQKIL ADGGSMVLLI LVVSQQNGTS
201: KLLTNATYNE TVPDLKATLS SQKRDWGSSW CQQYSIQFRR GFKERRHDYL S

Best Arabidopsis Sequence Match ( AT4G27420.1 )
(BLAST)

001: MDNQEVSMDV ETPIAKTNDD RSLPFSIFKK ANNPVTLKFE NLVYTVKLKD SQGCFGKNDK TEERTILKGL TGIVKPGEIL AMLGPSGSGK TSLLTALGGR
101: VGEGKGKLTG NISYNNKPLS KAVKRTTGFV TQDDALYPNL TVTETLVFTA LLRLPNSFKK QEKIKQAKAV MTELGLDRCK DTIIGGPFLR GVSGGERKRV
201: SIGQEILINP SLLFLDEPTS GLDSTTAQRI VSILWELARG GRTVVTTIHQ PSSRLFYMFD KLLLLSEGNP VYFGLGSNAM DYFASVGYSP LVERINPSDF
301: LLDIANGVGS DESQRPEAMK AALVAFYKTN LLDSVINEVK GQDDLCNKPR ESSRVATNTY GDWPTTWWQQ FCVLLKRGLK QRRHDSFSGM KVAQIFIVSF
401: LCGLLWWQTK ISRLQDQIGL LFFISSFWAF FPLFQQIFTF PQERAMLQKE RSSGMYRLSP YFLSRVVGDL PMELILPTCF LVITYWMAGL NHNLANFFVT
501: LLVLLVHVLV SGGLGLALGA LVMDQKSATT LGSVIMLTFL LAGGYYVQHV PVFISWIKYV SIGYYTYKLL ILGQYTANEL YPCGDNGKLR CHVGDFEGIK
601: HIGFNSGLVS ALALTAMLVV YRVIAYIALT RIGKTKSG

Arabidopsis Description

ABCG9ABCG9 [Source:UniProtKB/TrEMBL;Acc:A0A178V178]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.