Factsheet for GSMUA_Achr6P23160_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	76.6	78.74
GSMUA_Achr1P26950_001	Banana	plasma membrane	20.14	74.75
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	74.29	73.39
GSMUA_Achr1P26960_001	Banana	cytosol	23.67	69.32
TraesCS4D01G271500.1	Wheat	plastid	69.52	67.95
HORVU4Hr1G072620.1	Barley	plastid	69.93	67.9
VIT_08s0032g00790.t01	Wine grape	plastid	68.84	67.65
TraesCS4B01G272400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	69.66	67.37
TraesCS4A01G032900.1	Wheat	plastid	69.8	67.32
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	68.03	67.29
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	67.35	67.07
CDY04991	Canola	plastid	65.17	66.71
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	68.3	66.67
EER92832	Sorghum	plasma membrane	68.98	66.45
CDX70095	Canola	plastid	64.76	66.02
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	69.25	66.02
Solyc01g006720.2.1	Tomato	plastid	64.76	65.75
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	65.71	65.62
PGSC0003DMT400054994	Potato	plastid	64.63	65.43
CDY14079	Canola	plasma membrane	66.94	65.43
KRH68048	Soybean	plastid	65.71	65.27
AT5G06530.1	Thale cress	plasma membrane	66.53	65.11
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.12	64.63
CDX98933	Canola	plasma membrane	66.12	64.37
Bra009203.1-P	Field mustard	plasma membrane	65.85	64.11
GSMUA_Achr8P34440_001	Banana	plasma membrane	49.25	63.62
CDY23205	Canola	plastid	59.59	59.59
CDX95330	Canola	plastid	58.91	58.67
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	38.5	46.02
GSMUA_Achr2P04580_001	Banana	plasma membrane	36.19	44.41
GSMUA_Achr2P02720_001	Banana	mitochondrion	35.65	44.03
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	38.64	44.03
GSMUA_Achr11P...	Banana	plasma membrane	35.24	42.74
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	36.19	39.23
Bra033441.1-P	Field mustard	plastid	58.78	38.16
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	38.5	37.99
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	20.14	28.52
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	15.78	28.02
GSMUA_Achr9P00310_001	Banana	cytosol	19.59	27.85
GSMUA_Achr7P10690_001	Banana	cytosol	17.41	27.47
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	24.08	27.44
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	21.36	26.84
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	20.27	26.65
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	22.59	26.14
GSMUA_Achr5P28450_001	Banana	plasma membrane	24.76	26.07
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	24.63	25.64
GSMUA_Achr10P...	Banana	plasma membrane	23.13	25.37
GSMUA_Achr1P19280_001	Banana	plasma membrane	35.37	24.46
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	24.35	19.91
GSMUA_Achr6P08820_001	Banana	plasma membrane	25.31	15.05

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr6G23160_001	EnsemblPlants:GSMUA_Achr6P23160_001
EnsemblPlants:GSMUA_Achr6T23160_001	InterPro:IPR003439	UniProt:M0T9G4	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF286	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000294D6BE	SEG:seg	:	:	:

Description

ABC transporter G family member 22 [Source:GMGC_GENE;Acc:GSMUA_Achr6G23160_001]

Coordinates

chr6:-:23220824..23227437

Molecular Weight (calculated)

81853.9 Da

IEP (calculated)

9.703

GRAVY (calculated)

0.063

Length

735 amino acids

Sequence
(BLAST)

001: MDSAEPGIAM AKSDKLEMGA TRGPTMSSTE VVPTSAVNGS PSLSRKLSFG KKLMGSFKGG HHLRKTWSGH MKMDSEDVGS EASLSRASSA SLSFSYSFTG
101: FTALPEVSDT AAFGNNENEI DLEIQETRKS LMSEPTLPIY LKFTEVRYSV VLKGITTTTE KEILHGITGS VRPGELLALM GPSGSGKTTL LSLLGGRITA
201: NIIQGSVTYN DEPYTKSLKG RMGFVAQDDV LFAHLTVRET LTYAALLRLP RTMTREQKED RAMDAIYELG LERCQNTIIG GPFVRGVSGG ERKRVCIGNE
301: IIINPSLLFL DEPTSGLDST TALRIIQVLH GIAKLGKTVV TTIHQPSSRL FHRFDKLILL GKGSLLYFGK ASKAIKYFSS IGCSPLIAMN PAEFLLDLAS
401: GNINDVTVPS VLESKVQSKE SESNTRNGKP SPEDVHEYLV EAYEDRVADK QMRKILMPLP ISEDLKATLS SQKRDWGASW WQQYSILFWR GLNERRHDYL
501: SWMRITQVLA IAVILGLLWW KSSSTTTRGL EDQAGLLFFI SVFWGFFPVF TAIFTFPQER AMLTKERAVD MYKLSAYFMA RTTSDLPLDL ILPIIFLLIV
601: YFMAGLRRSI EHFFLTMLVV FLSIIAAQGL GLVIGASLMD IKKATTLGSV TVMTFMLAGG FFVRRVPVFI SWLRYVSFNY HTYRLLLKVQ YDHVPSSLNV
701: THLDNGVKEI TALTVMVLTY RIMAYVFLRR MKLPN

Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)

001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

Arabidopsis Description

ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.