Factsheet for GSMUA_Achr1P04620_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P23160_001	Banana	plastid	78.74	76.6
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	75.38	72.45
GSMUA_Achr1P26950_001	Banana	plasma membrane	19.86	71.72
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	68.67	66.53
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	69.09	66.49
TraesCS4D01G271500.1	Wheat	plastid	69.09	65.69
HORVU4Hr1G072620.1	Barley	plastid	69.37	65.52
VIT_08s0032g00790.t01	Wine grape	plastid	68.39	65.37
TraesCS4B01G272400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	69.23	65.13
TraesCS4A01G032900.1	Wheat	plastid	69.23	64.96
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	69.79	64.72
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	67.83	64.41
EER92832	Sorghum	plasma membrane	68.67	64.35
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	66.01	64.13
CDX70095	Canola	plastid	64.34	63.8
Solyc01g006720.2.1	Tomato	plastid	64.48	63.67
KRH68048	Soybean	plastid	65.87	63.65
CDY04991	Canola	plastid	63.64	63.37
PGSC0003DMT400054994	Potato	plastid	64.2	63.22
AT5G06530.1	Thale cress	plasma membrane	66.01	62.85
CDX98933	Canola	plasma membrane	66.15	62.65
Bra009203.1-P	Field mustard	plasma membrane	65.87	62.38
CDY14079	Canola	plasma membrane	65.45	62.23
GSMUA_Achr8P34440_001	Banana	plasma membrane	49.51	62.21
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.03	61.84
GSMUA_Achr1P26960_001	Banana	cytosol	20.56	58.57
CDY23205	Canola	plastid	59.72	58.1
CDX95330	Canola	plastid	58.88	57.05
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	37.34	43.41
GSMUA_Achr2P04580_001	Banana	plasma membrane	35.94	42.9
GSMUA_Achr2P02720_001	Banana	mitochondrion	35.1	42.18
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	37.2	41.24
GSMUA_Achr11P...	Banana	plasma membrane	32.87	38.78
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	38.6	37.05
Bra033441.1-P	Field mustard	plastid	58.32	36.84
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	33.99	35.84
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	21.26	29.29
GSMUA_Achr9P00310_001	Banana	cytosol	20.98	29.01
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	16.22	28.02
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	22.1	27.01
GSMUA_Achr7P10690_001	Banana	cytosol	17.48	26.82
GSMUA_Achr5P28450_001	Banana	plasma membrane	25.17	25.79
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	23.22	25.74
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	22.66	25.51
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	24.76	25.07
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	19.58	25.04
GSMUA_Achr10P...	Banana	plasma membrane	22.1	23.58
GSMUA_Achr1P19280_001	Banana	plasma membrane	34.27	23.05
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	24.48	19.47
GSMUA_Achr6P08820_001	Banana	plasma membrane	26.15	15.13

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr1G04620_001
EnsemblPlants:GSMUA_Achr1P04620_001	EnsemblPlants:GSMUA_Achr1T04620_001	InterPro:IPR003439	UniProt:M0RX20	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF286	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00029550BB	SEG:seg	:	:

Description

ABC transporter G family member 22 [Source:GMGC_GENE;Acc:GSMUA_Achr1G04620_001]

Coordinates

chr1:-:3835547..3838829

Molecular Weight (calculated)

79234.3 Da

IEP (calculated)

9.840

GRAVY (calculated)

0.006

Length

715 amino acids

Sequence
(BLAST)

001: MDSAAGGIAR TKSDQLEMAP PRPPTLSPTP SAESMPVADA NGGPSLSRKS SLGKKLVGSS PATKAGHHLR STRSGHMKVD CEDGGSGGSL SRASSASLGF
101: SFSFTGFTAL PEDIVSDITA LTGGDKGIDL EPGRSRKRLM SETTYPIYVK FTEVRYKVIL RGITRTNEKD ILQGITGSAK PGELLALMGP SGSGKTTLLS
201: LLSGRTADNV VQGSITYNDE PYAKSLKSRI GFVTQDDVLF AHLTVRETLT YAALLRLPRT MTRKQKEERA MNVIYELGLE RCQDTIIGGS FVRGVSGGER
301: KRVCIGNEII MNPSLLFLDE PTSGLDSTTA LRTIQVLNDI AESGKTVVTT IHQPSSRLFH RFDKLILLGR GTEFLLDLAN GNINDVTLPS ELEEKVQSRN
401: LGGSTRNAKP SPEDVHEYLV ETYETRVADK QKKKLLAPLP ISEDMKITLS STKRDWGASW WQQYSILFWR GLKERRHDYL SWMRITQVLA IAVILGLLWW
501: HSNIATQIGQ EDQAGLLFFI SVFWGFFPVF TAIFTFPQER AMLNKERAVD MYRLSAYFIA RTTSDLPLDL LLPIIFLLIV YFMAGLRLSI EHFFLSMLVV
601: FLSIVAAQGL GLAIGASFMN IKQATTLASV TVMTFMLAGG FFVKRVPAFI SWLRFISFNY HSYRLLLKVQ YDHVPPHLNV NHLDNGVMEV AAMIAMVFAY
701: RFLAYVSLRR MKLSS

Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)

001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

Arabidopsis Description

ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.