Factsheet for GSMUA_Achr4P27670_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0191600-04	Rice	nucleus, peroxisome, plasma membrane	67.4	61.67
TraesCS3B01G285600.1	Wheat	cytosol, peroxisome, plasma membrane	68.03	60.5
TraesCS3D01G254600.1	Wheat	cytosol, peroxisome, plasma membrane	68.35	60.19
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	69.92	60.16
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	69.29	60.11
TraesCS3A01G253700.1	Wheat	cytosol, peroxisome, plasma membrane	68.19	60.06
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	61.73	58.42
KRH39507	Soybean	cytosol	65.83	57.26
PGSC0003DMT400084876	Potato	cytosol	64.25	55.97
Solyc09g098410.1.1	Tomato	nucleus	63.62	55.42
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	49.13	48.37
GSMUA_Achr5P28450_001	Banana	plasma membrane	40.79	37.11
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	40.63	36.54
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	28.82	35.26
GSMUA_Achr7P10690_001	Banana	cytosol	25.67	34.98
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	31.97	34.7
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	22.2	34.06
HORVU3Hr1G066220.1	Barley	plastid	41.73	33.25
GSMUA_Achr9P00310_001	Banana	cytosol	26.93	33.08
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	28.03	31.84
GSMUA_Achr1P26960_001	Banana	cytosol	11.34	28.69
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	40.0	28.25
GSMUA_Achr8P34440_001	Banana	plasma membrane	23.15	25.83
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	24.57	25.37
GSMUA_Achr2P02720_001	Banana	mitochondrion	22.99	24.54
GSMUA_Achr11P...	Banana	plasma membrane	22.68	23.76
GSMUA_Achr2P04580_001	Banana	plasma membrane	22.36	23.71
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	23.62	23.26
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	25.51	22.66
GSMUA_Achr6P23160_001	Banana	plastid	26.14	22.59
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	23.62	22.12
GSMUA_Achr10P...	Banana	plasma membrane	23.31	22.09
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	25.83	22.04
GSMUA_Achr6P08820_001	Banana	plasma membrane	41.57	21.36
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	24.72	21.07
GSMUA_Achr1P26950_001	Banana	plasma membrane	5.83	18.69
GSMUA_Achr1P19280_001	Banana	plasma membrane	24.41	14.58

Protein Annotations

MapMan:24.1.3.2.2	MapMan:26.9.4.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr4G27670_001
EnsemblPlants:GSMUA_Achr4P27670_001	EnsemblPlants:GSMUA_Achr4T27670_001	InterPro:IPR003439	UniProt:M0SSM9	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000296EDE5	SEG:seg	:	:

Description

Putative ABC transporter G family member 16 [Source:GMGC_GENE;Acc:GSMUA_Achr4G27670_001]

Coordinates

chr4:+:26419830..26423232

Molecular Weight (calculated)

71556.2 Da

IEP (calculated)

10.293

GRAVY (calculated)

0.114

Length

635 amino acids

Sequence
(BLAST)

001: MCTSYQDSHS TKLRVPVTIN TILRLMPSQR YRKIRVTRRA ALTYTVSKKQ KVGGGWEKQE VDLLRRITGY APKGRITAVM GPSGAGKSTF LDGLAGRIAS
101: GRLKGRVSLH GEEMSPGLIK RVSAYVMQDD RLFPMLTVYE TLMFAADFRL GSIPRSHKKH RVEQLIDQLG LTSSRNTYIG DEGTRGVSGG ERRRVSIGVD
201: IIHGPALLFL DEPTSGLDST SAHSVIERVF DIARSGSTVI LTIHQPSHRI LMLLDHLIVL ARGQLMFMGA PRDVGGHLSR MGRKVPSGES AVEYLLDVIQ
301: EYDQSGLGAT ASEATAAAEA SRLSRFLHYI HAIWLIDAAA AACGRHTAHD LRGLPKFANS YSAEAWTLMR RNFINIRRTP ELFLSRQMVL TVMGFMMATM
401: FLRPKDDLQG VSNRLSFFIF TVCLFFFSSN DAVPAFIQER FIFVRETSHN AYRASSYTIA GLVTYLPFLL LQAATYAGIV WFALRLHGDF HYFLIMLYAS
501: LLATNSFVVF VSSVVPSFIL GYAVVIAFTA LFFLFCGYFI SRTSIPNGWK WMNTISTLKY TYEGLLTNEF VRDRVFFHDP FENRPVNGAD VLRQLSISTS
601: ESYKWKMVLY LVGWAVLYRM FFYLILRFAS RNLRS

Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)

001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK

Arabidopsis Description

ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.