Factsheet for TraesCS3B01G285600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G253700.1	Wheat	cytosol, peroxisome, plasma membrane	98.46	97.5
TraesCS3D01G254600.1	Wheat	cytosol, peroxisome, plasma membrane	98.32	97.36
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	87.53	84.69
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	86.55	84.43
Os07t0191600-04	Rice	nucleus, peroxisome, plasma membrane	80.11	82.42
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	60.5	68.03
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	61.2	65.13
KRH39507	Soybean	cytosol	65.27	63.84
Solyc09g098410.1.1	Tomato	nucleus	63.73	62.41
PGSC0003DMT400084876	Potato	cytosol	63.73	62.41
HORVU3Hr1G066220.1	Barley	plastid	56.3	50.44
TraesCS5B01G203200.1	Wheat	cytosol	48.6	39.84
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	37.82	39.65
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	38.38	39.48
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	37.11	39.26
TraesCS3B01G387500.1	Wheat	plastid	38.1	35.93
TraesCS3B01G251300.1	Wheat	plastid	29.69	35.04
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	37.25	33.59
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	28.01	30.63
TraesCS2B01G612200.1	Wheat	plasma membrane	27.59	29.19
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	26.75	28.85
TraesCS4B01G095200.1	Wheat	plastid	23.11	25.62
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	23.67	24.39
TraesCS3B01G017100.1	Wheat	extracellular, plasma membrane, vacuole	21.71	23.34
TraesCS4B01G272400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	24.51	23.03

Protein Annotations

MapMan:26.9.4.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G285600	EnsemblPlants:TraesCS3B01G285600.1	SEG:seg	:

Description

No Description!

Coordinates

chr3B:+:457200581..457203173

Molecular Weight (calculated)

78664.9 Da

IEP (calculated)

9.427

GRAVY (calculated)

0.008

Length

714 amino acids

Sequence
(BLAST)

001: MAQPNHRYGG HRDLEAVIDM DQPEKPTAKG GSRFSFTGGL EFTSLTYTVV KKQRGVGGEW EKKDVDLLHE ITGYAPKGCV TAVMGPSGAG KSTFLDALAG
101: RISSLDGRVA LDGVEMSPSV IKRSSAYVMQ DDRLFPMLTV YETLLFAADF RLGSAVSPSD KKLRVDNLIE QLGLTTSRNT YIGDEGTRGV SGGERRRVSI
201: GVDIIHGPAL LFLDEPTSGL DSTSAHSVIE KVHDIACAGS TVVLTIHQPS SRILQLLDHL IILARGQLMY SGGPKEVTAH LGRMGRKVPK GENSIEHLLD
301: VIQEYDQSEF GVNALAEFCL TGLKPRKLAA EGISTVSSIP PTPVGPGGED FDHSLRSQHS KSPWSGAQFT PSRRPKKDQS GKSQNPPRYG PEIVMGTPTP
401: LSSISGYTVN EADYLSPAQR ASTTGAAGVG INALGHRGKF ANSYAAEVWV LMRRNFTNIW RTPELFLSRL MVLTVMGFLM ATMFTKPKDN TQGITNRLSF
501: FIFTVCVFFF SSNDAVPAFI QERFIFIRET SHNAYRASAY VVAGVITYLP FLLLQSAAYA LITWWAIGLH GQFVYFLVML YASLLSTNSF VVFISSIVPN
601: FILGYAAVIA FTALFFLFCG YFVNSHSIPQ GWKWMNTVST MKYPYEGLLM NEFGGERDFS SNPPLTGNAI LESLTISVAK DRKWRMVLYL LGWAVFYRVL
701: FYLVLRFASK NKRK

Best Arabidopsis Sequence Match ( AT2G13610.1 )
(BLAST)

001: MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ
101: TGSVYVNKRP VDRANFKKIS GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV RGISGGERRR VSIGVEVIHD
201: PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT
301: KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG
401: SGIVLGLIFH NLKDDLKGAR ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL AILFSTPVYW LVGLNPSFMA
501: FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE
601: DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA

Arabidopsis Description

ABCG5ABC transporter G family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT6]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.