Factsheet for TraesCS3D01G254600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G253700.1	Wheat	cytosol, peroxisome, plasma membrane	99.03	99.03
TraesCS3B01G285600.1	Wheat	cytosol, peroxisome, plasma membrane	97.36	98.32
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	87.24	85.23
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	85.71	84.43
Os07t0191600-04	Rice	nucleus, peroxisome, plasma membrane	78.92	81.99
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	60.19	68.35
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	60.89	65.42
KRH39507	Soybean	cytosol	64.63	63.84
Solyc09g098410.1.1	Tomato	nucleus	63.11	62.41
PGSC0003DMT400084876	Potato	cytosol	63.11	62.41
HORVU3Hr1G066220.1	Barley	plastid	55.76	50.44
TraesCS5D01G211000.1	Wheat	cytosol	48.27	39.55
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	37.17	39.35
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	37.73	39.31
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	37.59	35.85
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	29.54	35.21
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	36.75	31.51
TraesCS1D01G240600.1	Wheat	plasma membrane	27.32	30.17
TraesCS2D01G585300.1	Wheat	plasma membrane	27.32	29.23
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	26.63	29.0
TraesCS4D01G092000.1	Wheat	plasma membrane	23.16	25.77
TraesCS7D01G375300.1	Wheat	cytosol, peroxisome, plasma membrane	23.44	25.49
TraesCS7D01G067300.1	Wheat	cytosol, nucleus, plasma membrane, plastid	23.58	24.75
TraesCS4D01G271500.1	Wheat	plastid	24.13	23.14
TraesCS3D01G019000.1	Wheat	golgi	21.22	22.97

Protein Annotations

MapMan:26.9.4.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G254600	EnsemblPlants:TraesCS3D01G254600.1	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:355990715..355993214

Molecular Weight (calculated)

79479.0 Da

IEP (calculated)

9.350

GRAVY (calculated)

0.029

Length

721 amino acids

Sequence
(BLAST)

001: MAQPNHRYGG HRDLEAVIDM DQPEMPTAKG GSRFSFTGGL EFTSLTYTVV KKQRGVGGEW EKKDVDLLHE ITGYAPKGCV TAVMGPSGAG KSTFLDALAG
101: RISSLDGRVA LDGVEMSPSV IKRSSAYVMQ DDRLFPMLTV YETLLFAADF RLGSAVSPSD KKLRVDNLIE QLGLTTSRNT YIGDEGTRGV SGGERRRVSI
201: GVDIIHGPAL LFLDEPTSGL DSTSAHSVIE KVHDIACAGS TVVLTIHQPS SRILQLLDHL IILARGQLMY SGGPKEVTAH LGRMGRKVPK GENSIEHLLD
301: VIQEYDQSEF GVNALAEFCL TGLKPRKLAA EGISTVSSIP PTPVGPGGED FDHSLRSQHS KSPWSGAQFT PSRRPRKDQS GKSQNPPSLS PGIHRYGPEI
401: VMGTPTPLSS ISVYTVNEAD YLSPAQRASA TGAPGVGINA LGHRGKFANS YAAEVWVLMR RNFTNIWRTP ELFLSRLMVL TVMGFLMATM FIKPKDNTQG
501: ITNRLSFFIF TVCVFFFSSN DAVPAFIQER FIFIRETSHN AYRASAYVVA GVITYLPFLL LQSAAYALIT WWAIGLHGQF VYFLVMLYAS LLSTNSFVVF
601: ISSIVPNFIL GYAAVIAFTA LFFLFCGYFV DSHSIPQGWK WMNTVSTMKY PYEGLLMNEF GGTRNFSSNP PLDGNAILEN LTISVVKDRK WRMVLYLLGW
701: AVFYRVLFYL VLRFASKNKR K

Best Arabidopsis Sequence Match ( AT2G13610.1 )
(BLAST)

001: MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ
101: TGSVYVNKRP VDRANFKKIS GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV RGISGGERRR VSIGVEVIHD
201: PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT
301: KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG
401: SGIVLGLIFH NLKDDLKGAR ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL AILFSTPVYW LVGLNPSFMA
501: FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE
601: DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA

Arabidopsis Description

ABCG5ABC transporter G family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT6]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.