Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G203200.1 | Wheat | cytosol | 97.61 | 98.62 |
| HORVU5Hr1G060690.4 | Barley | mitochondrion | 80.68 | 97.93 |
| TraesCS5A01G205100.1 | Wheat | mitochondrion | 98.07 | 95.57 |
| OQU80214 | Sorghum | cytosol, mitochondrion, peroxisome, plasma membrane | 81.25 | 81.53 |
| Zm00001d024075_P001 | Maize | cytosol | 82.27 | 81.17 |
| GSMUA_Achr9P27200_001 | Banana | cytosol, peroxisome, plasma membrane | 57.39 | 78.29 |
| Os09t0401100-01 | Rice | extracellular | 77.39 | 77.92 |
| VIT_17s0000g02200.t01 | Wine grape | cytosol | 57.5 | 71.77 |
| KRH60557 | Soybean | cytosol | 63.41 | 69.84 |
| KRH41868 | Soybean | cytosol | 62.5 | 69.27 |
| PGSC0003DMT400050007 | Potato | cytosol | 62.73 | 66.35 |
| Solyc01g097430.2.1 | Tomato | cytosol, nucleus | 62.95 | 66.11 |
| TraesCS3D01G254600.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.55 | 48.27 |
| TraesCS1D01G052000.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.27 | 41.04 |
| TraesCS5D01G093600.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 31.7 | 40.97 |
| TraesCS3D01G348400.1 | Wheat | plasma membrane, plastid | 32.27 | 37.57 |
| TraesCS3D01G231500.1 | Wheat | mitochondrion, plastid | 23.64 | 34.38 |
| TraesCS4D01G201700.1 | Wheat | mitochondrion, plasma membrane, plastid | 31.7 | 33.17 |
| TraesCS1D01G240600.1 | Wheat | plasma membrane | 21.25 | 28.64 |
| TraesCS2D01G585300.1 | Wheat | plasma membrane | 21.82 | 28.49 |
| TraesCS7D01G375300.1 | Wheat | cytosol, peroxisome, plasma membrane | 20.0 | 26.55 |
| TraesCS7D01G337600.1 | Wheat | cytosol, peroxisome, plasma membrane | 19.77 | 26.28 |
| TraesCS4D01G092000.1 | Wheat | plasma membrane | 19.09 | 25.93 |
| TraesCS7D01G067300.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 19.77 | 25.33 |
| TraesCS4D01G271500.1 | Wheat | plastid | 21.59 | 25.27 |
| TraesCS3D01G019000.1 | Wheat | golgi | 19.09 | 25.23 |
Protein Annotations
| MapMan:26.9.4.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF01061 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF180 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5D01G211000 | EnsemblPlants:TraesCS5D01G211000.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr5D:+:319317216..319320529
Molecular Weight (calculated)
98864.9 Da
IEP (calculated)
9.622
GRAVY (calculated)
-0.211
Length
880 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQPQQHRTA MRRDGERDHR RAAAERPAAH RTERAAADET AHRRAAEAPP RRTERAAEVL PAAHRTERAG ETAATARRAA EMPARRTERK KSLESLLDAA
101: DVRGKRGGPV PAVGEKITTF PGQGLEFKNL SYSVIKKQKK DGVKIKKEVY LLNDISGQAL RGQVTAILGP SGAGKSTFLD AIAGRIAKGS LEGSVSIDGR
201: PVTTSYMKQI SSYVMQDDQL FPMLTVLETL TFAAEVRLPP SLSRAEKLKR VWELIEQLGL QTTAHTYIGD EGVRGVSGGE RRRVSIGTDI IHKPSLLFLD
301: EPTSGLDSTS AHSVVEKVKD IARGGSIVLM TIHQPSFRIQ MLLDRIVILA RGRLIYLGNP TTLPTYLAGF GRPVPEGENS MEYLLDVIKE YDESTLGLEP
401: LVAYQRDGSK PTEAAKTPVP RTPRTPYQKS VQFRQMQLKS NQFSLASATP HANPFSNFES YNIDDEEGDF DNSLERKIQT PMHTANSGYH PRLASQFYKD
501: FSVWVYNGVA GTPQRRPTWT PARTPARTPM SSYQRSRVNT PHRSIPPSPQ EPVFKPEEPD YEEQGLDIEP LDAPEDGPKF ANPWLREVAV LSWRTALNVV
601: RTPELFLSRE IVLTVMALIL STLFHRLSGS DFLTINRILN FYIFAVCLVF FSSNDAVPTF IQERFIFIRE RSHNAYRAST YVISSLIVYL PFFAIQGFTF
701: AVITKFMLHL NSSLLYFWIV LFASLITTNA YVMLVSALVP SYITGYAVVI ATTALFFLTC GFFLKRNKIP IYWRWLHYIS AIKYPFEALL VNEFKGSHCY
801: TGTFNQLSPG PLGEIKESGL HDQLNPNITT CPLIGQDVLT SMDITMDSIW VDVAILLAWG VLYRLFFYVV LRFYSKNERK
101: DVRGKRGGPV PAVGEKITTF PGQGLEFKNL SYSVIKKQKK DGVKIKKEVY LLNDISGQAL RGQVTAILGP SGAGKSTFLD AIAGRIAKGS LEGSVSIDGR
201: PVTTSYMKQI SSYVMQDDQL FPMLTVLETL TFAAEVRLPP SLSRAEKLKR VWELIEQLGL QTTAHTYIGD EGVRGVSGGE RRRVSIGTDI IHKPSLLFLD
301: EPTSGLDSTS AHSVVEKVKD IARGGSIVLM TIHQPSFRIQ MLLDRIVILA RGRLIYLGNP TTLPTYLAGF GRPVPEGENS MEYLLDVIKE YDESTLGLEP
401: LVAYQRDGSK PTEAAKTPVP RTPRTPYQKS VQFRQMQLKS NQFSLASATP HANPFSNFES YNIDDEEGDF DNSLERKIQT PMHTANSGYH PRLASQFYKD
501: FSVWVYNGVA GTPQRRPTWT PARTPARTPM SSYQRSRVNT PHRSIPPSPQ EPVFKPEEPD YEEQGLDIEP LDAPEDGPKF ANPWLREVAV LSWRTALNVV
601: RTPELFLSRE IVLTVMALIL STLFHRLSGS DFLTINRILN FYIFAVCLVF FSSNDAVPTF IQERFIFIRE RSHNAYRAST YVISSLIVYL PFFAIQGFTF
701: AVITKFMLHL NSSLLYFWIV LFASLITTNA YVMLVSALVP SYITGYAVVI ATTALFFLTC GFFLKRNKIP IYWRWLHYIS AIKYPFEALL VNEFKGSHCY
801: TGTFNQLSPG PLGEIKESGL HDQLNPNITT CPLIGQDVLT SMDITMDSIW VDVAILLAWG VLYRLFFYVV LRFYSKNERK
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.