Factsheet for Zm00001d024075_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	90.7	92.25
HORVU5Hr1G060690.4	Barley	mitochondrion	70.96	87.31
TraesCS5B01G203200.1	Wheat	cytosol	81.28	83.24
TraesCS5D01G211000.1	Wheat	cytosol	81.17	82.27
TraesCS5A01G205100.1	Wheat	mitochondrion	80.61	79.62
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	56.61	78.29
Os09t0401100-01	Rice	extracellular	76.35	77.92
VIT_17s0000g02200.t01	Wine grape	cytosol	56.73	71.77
KRH60557	Soybean	cytosol	61.55	68.71
KRH41868	Soybean	cytosol	60.87	68.39
PGSC0003DMT400050007	Potato	cytosol	61.44	65.87
Solyc01g097430.2.1	Tomato	cytosol, nucleus	61.44	65.39
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	39.46	47.7
Zm00001d035553_P001	Maize	plasma membrane	31.95	39.92
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	31.28	39.19
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	31.95	38.36
Zm00001d042953_P001	Maize	plasma membrane	31.61	37.06
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	31.84	35.95
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	18.72	32.94
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	21.97	32.18
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	19.73	28.48
Zm00001d004762_P001	Maize	plasma membrane	19.73	27.85
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	8.41	27.27
Zm00001d053049_P001	Maize	plasma membrane	19.39	27.2
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	20.74	26.66
Zm00001d026706_P005	Maize	plasma membrane	22.31	26.53
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	20.07	26.48
Zm00001d024497_P001	Maize	plastid	20.07	24.62
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	20.74	24.57
Zm00001d008512_P002	Maize	golgi, plasma membrane, vacuole	18.95	24.32

Protein Annotations

MapMan:26.9.4.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ProteinID:AQK40645.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
UniProt:K7TKH5	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000221762D
EnsemblPlantsGene:Zm00001d024075	EnsemblPlants:Zm00001d024075_P001	EnsemblPlants:Zm00001d024075_T001	SEG:seg	:	:

Description

ABC transporter G family member 6

Coordinates

chr10:-:42074660..42079454

Molecular Weight (calculated)

99976.9 Da

IEP (calculated)

9.530

GRAVY (calculated)

-0.229

Length

892 amino acids

Sequence
(BLAST)

001: MHRQQQQQHE VDLATGARRP SRGHANGGHR AAAEMPAGGH RPERPAGHRM DRAETRATHH HHHHATERAG EGRRTTAAAE MPAWQTERKK SLESLLDAAG
101: DARGRPQHQH QHHHRGSGGH VPVRPVPVPG VKVINFPGQG LEFKELSYSV IKKQKKDGVK VKKEVYLLND ISGQALRGQV TAILGPSGAG KSTFLDALAG
201: RIAKGSLEGS VSIDGRSVTT SYMKQISSYV MQDDQLFPML TVLETLRFAA EVRLPPSLSR AEKLNRVWEL IEQLGLQTTA HTYIGDEGIR GVSGGERRRV
301: SIGTDIIHKP SLLFLDEPTS GLDSTSAYSV VEKVKEIAKG GSIVLMTIHQ PSFRIQMLLD RIVILARGRL IYLGTPLTLP THLAGFGRPV PDGENSIEYL
401: LDVIKEYDES TLGLEPLVAY QRDGSKPDEA AKTPIPKTPR TPYQKSVQFR QIQLKSNQFS VTTGTPHANP MSNFESYNID DEDEEFDNSL ERKSHTPLHT
501: GTSTYHPRLA SQFYKDFSVW VYHGVTGTPH RKPTWTPART PARTPVSSYQ QRSRVATPQH APPPQSPREP VFKPEEPSYH EYQLELEPLD APEDGPKFAN
601: PWFREVVVLS WRTALNVVRT PELFLSREIV LAVMALILST LFHRLSDANF TTINRLLNFY IFAVCLVFFS SNDAVPTFIQ ERFIFIRERS HNAYRASSYV
701: VSSLIVYLPF FAIQGFTFAV ITKFMLHLQS SLVNFWIILF ASLITTNAYV MLVSALVPSY ITGYAVVIAT TALFFITCGF FLKRTMIPMA WRWLHYISAI
801: KYPFEALLVN EFKGSECYVG TQNQLSPGPL GQVSNLNSTS TTCPLVGQDV LSTMDIAIDN IWIDVAILLA WGVLYRLVFY VVLRFYSKNE RK

Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)

001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR

Arabidopsis Description

ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.