Factsheet for Zm00001d008512_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	91.37	95.63
Os01t0121700-01	Rice	plasma membrane	85.61	89.07
TraesCS3D01G019000.1	Wheat	golgi	83.74	87.39
TraesCS3B01G017100.1	Wheat	extracellular, plasma membrane, vacuole	83.31	87.2
TraesCS3A01G026500.1	Wheat	extracellular, plasma membrane, vacuole	83.31	86.94
HORVU3Hr1G005830.3	Barley	cytosol	46.04	84.66
GSMUA_Achr10P...	Banana	plasma membrane	74.1	76.87
HORVU3Hr1G005770.1	Barley	endoplasmic reticulum	38.7	70.42
Solyc05g008350.2.1	Tomato	nucleus, plastid	69.35	67.89
VIT_01s0011g04670.t01	Wine grape	mitochondrion, plasma membrane	70.07	66.8
PGSC0003DMT400078356	Potato	extracellular, plasma membrane, vacuole	69.21	66.53
AT2G01320.3	Thale cress	peroxisome, plastid, vacuole	69.21	66.07
KRH35792	Soybean	plasma membrane	68.92	66.07
KRG90976	Soybean	plasma membrane	67.48	65.59
CDY37372	Canola	cytosol, peroxisome, plasma membrane	69.06	65.48
CDY40385	Canola	cytosol, peroxisome, plasma membrane	68.92	64.99
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.92	64.99
Zm00001d004762_P001	Maize	plasma membrane	26.62	29.27
Zm00001d053049_P001	Maize	plasma membrane	26.62	29.09
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	24.6	25.3
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	22.01	25.12
Zm00001d035553_P001	Maize	plasma membrane	25.47	24.79
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	26.47	24.76
Zm00001d042953_P001	Maize	plasma membrane	27.05	24.7
Zm00001d024497_P001	Maize	plastid	25.76	24.62
Zm00001d027723_P002	Maize	cytosol, nucleus, plasma membrane	26.47	24.44
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	24.6	24.02
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	20.86	23.46
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	16.98	23.27
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	21.87	21.9
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	24.75	21.77
Zm00001d026706_P005	Maize	plasma membrane	22.73	21.07
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	21.3	20.05
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	7.91	20.0
Zm00001d024075_P001	Maize	cytosol	24.32	18.95

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6FDP9	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:AQK90097.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF262	SMART:SM00382	SUPFAM:SSF52540	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0008425F2F	EnsemblPlantsGene:Zm00001d008512	EnsemblPlants:Zm00001d008512_P002	EnsemblPlants:Zm00001d008512_T002	SEG:seg	:

Description

ABC-2 type transporter family protein

Coordinates

chr8:-:11119067..11126014

Molecular Weight (calculated)

76376.9 Da

IEP (calculated)

9.082

GRAVY (calculated)

0.051

Length

695 amino acids

Sequence
(BLAST)

001: MEVRGLGQLL AALAAAFFVR AIAGPGPALL PPAEDTETDE ADAEAGEGGG GGVPPVTIRW ARITCALKNK RGEVARFLLS NVSGEAKPGR LLALMGPSGS
101: GKTTLLNVLA GQLAASSSLH LSGFLYINGR PISKGGYKIA FVRQEDLFFS QLTVRETLSL AAELQLPDLW APERKESYVN DLLLRMGLVN CADSIVGDAK
201: VRGISGGEKK RLSLACELIA SPSVIFADEP TTGLDAFQAE KVMETLRQLA QDGHTVICSI HQPRGSVYGK FDDIVLLSDG ETVYMGPAKE EPLTYFSSLG
301: YQCPDHMNPA EFLADLISID YGSTESVQSS QKRIENLIEA FSNKSVVTEG NNLIAIPEDP ELSAKLVRKT TVKKRHGWWR QFRLLFKRAW MQVHLNISVL
401: WLTISRHPLL FVMCRIFCVQ AFRDGPTNKV RSRMSVASAV IFGSVFWRMG KSQTSIQDRM GLLQVAAINT AMAALTKTVG VFPKERSIVD RERAKGSYAL
501: GPYLSSKLLA EIPIGAAFPL IFGSILYPMA KLHPTFSRFA KFCGIVTVES FAASAMGLTV GAMAPTTEAA MALGPSLMTV FIVFGGYYVN PDNTPVIFRW
601: IPRISLIRWA FQGLCINEFK GLQFEQQHSY DIQTGEQALE RFSLGGIRIA DTLVAQGRIL MFWYWSTYLL LKKNRPKYQQ LLPPLEQDKN KPQVE

Best Arabidopsis Sequence Match ( AT2G01320.3 )
(BLAST)

001: MAPFGGKSLA DVVSGIGGNG VGGALAAVAA ALLVRLFAGP GIALLPEDEA EDDYAETEDG GGDSIRPVTI RWRNITCSLS DKSSKSVRFL LKNVSGEAKP
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEAGSKV

Arabidopsis Description

ABCG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSW5]
SUBAcon: [peroxisome,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.