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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40385 Canola cytosol, peroxisome, plasma membrane 99.32 98.78
Bra014326.1-P Field mustard cytosol, peroxisome, plasma membrane 99.18 98.64
AT2G01320.3 Thale cress peroxisome, plastid, vacuole 89.22 89.84
VIT_01s0011g04670.t01 Wine grape mitochondrion, plasma membrane 75.72 76.13
KRH35792 Soybean plasma membrane 73.53 74.34
KRG90976 Soybean plasma membrane 72.44 74.27
Solyc05g008350.2.1 Tomato nucleus, plastid 71.08 73.38
PGSC0003DMT400078356 Potato extracellular, plasma membrane, vacuole 71.9 72.89
GSMUA_Achr10P... Banana plasma membrane 66.58 72.84
EES00402 Sorghum endoplasmic reticulum, golgi, plasma membrane 64.94 71.69
TraesCS3B01G017100.1 Wheat extracellular, plasma membrane, vacuole 64.39 71.08
TraesCS3D01G019000.1 Wheat golgi 64.53 71.02
Os01t0121700-01 Rice plasma membrane 64.67 70.96
HORVU3Hr1G005830.3 Barley cytosol 36.56 70.9
TraesCS3A01G026500.1 Wheat extracellular, plasma membrane, vacuole 64.26 70.72
Zm00001d008512_P002 Maize golgi, plasma membrane, vacuole 65.48 69.06
HORVU3Hr1G005770.1 Barley endoplasmic reticulum 30.83 59.16
CDX96366 Canola cytosol 15.69 31.17
CDY36670 Canola cytosol 14.87 30.03
CDY51602 Canola plastid 25.51 28.08
CDY48079 Canola plastid 25.24 27.82
CDY50951 Canola cytosol, peroxisome, plastid 24.28 27.77
CDY47690 Canola cytosol, peroxisome, plastid 24.28 27.77
CDY49155 Canola cytosol, peroxisome, plasma membrane 24.15 27.27
CDY02516 Canola cytosol, peroxisome, plasma membrane 21.69 27.04
CDY46506 Canola cytosol, peroxisome, plasma membrane 24.56 26.95
CDY59400 Canola cytosol, plasma membrane, plastid 21.56 26.87
CDX76121 Canola cytosol 17.19 26.75
CDX68292 Canola cytosol, peroxisome, plasma membrane 23.6 26.62
CDX99764 Canola cytosol, peroxisome, plasma membrane 24.69 26.42
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 24.56 26.32
CDX93119 Canola cytosol, peroxisome, plasma membrane 21.56 26.12
CDX89610 Canola cytosol, peroxisome, plasma membrane 21.56 26.12
CDX72849 Canola cytosol, peroxisome, plasma membrane 24.28 26.1
CDY03668 Canola plasma membrane 24.42 26.09
CDY29304 Canola cytosol, peroxisome, plasma membrane 22.51 25.86
CDX92829 Canola plasma membrane 22.65 25.78
CDX89252 Canola cytosol, peroxisome, plasma membrane 22.37 25.71
CDX94418 Canola plastid 20.05 25.65
CDY29837 Canola plasma membrane 22.51 25.62
CDY27043 Canola plastid 20.46 25.47
CDY02907 Canola cytosol, peroxisome, plasma membrane 21.96 25.35
CDY12359 Canola cytosol, nucleus, plasma membrane 10.37 25.25
CDX89396 Canola plasma membrane 19.65 25.13
CDY13996 Canola plasma membrane 16.37 25.05
CDY12299 Canola cytosol, peroxisome, plasma membrane 24.28 25.0
CDX96159 Canola plastid 20.05 24.96
CDX76119 Canola cytosol, peroxisome, plasma membrane 22.51 24.74
CDX92533 Canola plastid 21.15 24.64
CDY24203 Canola peroxisome 22.78 24.52
CDY43362 Canola cytosol, peroxisome, plasma membrane 22.78 24.52
CDX67624 Canola cytosol, peroxisome, plasma membrane 23.6 24.47
CDX74853 Canola plastid 20.46 24.31
CDY04991 Canola plastid 23.33 23.82
CDY40201 Canola cytosol 22.78 23.59
CDX70095 Canola plastid 23.06 23.44
CDY37656 Canola cytosol, peroxisome, plasma membrane 22.51 23.14
CDY65003 Canola cytosol, peroxisome, plasma membrane 22.51 23.11
CDY14079 Canola plasma membrane 23.6 23.01
CDX93388 Canola plasma membrane 23.19 22.94
CDY18451 Canola cytosol, peroxisome, plasma membrane 23.19 22.91
CDY23205 Canola plastid 22.92 22.86
CDX69629 Canola plastid 22.51 22.66
CDX98933 Canola plasma membrane 23.33 22.65
CDY50899 Canola cytosol 10.23 22.52
CDX73549 Canola cytosol, peroxisome, plasma membrane 23.19 22.49
CDX95330 Canola plastid 22.51 22.36
CDY09810 Canola plastid 22.51 21.94
CDX73404 Canola plasma membrane 22.78 21.17
CDX96365 Canola plasma membrane 10.5 19.95
CDY36671 Canola plasma membrane 9.41 19.94
CDY44641 Canola plasma membrane 6.96 17.17
CDY02906 Canola plasma membrane 23.47 13.39
CDX76122 Canola plasma membrane 23.33 13.34
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078HHN0UniProt:A0A078HHN0InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY37372ProteinID:CDY37372ProteinID:CDY37372.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00063923001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF262
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EF27ADSEG:seg:
Description
BnaC02g33900DBnaC02g33900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHN0]
Coordinates
chrLK032398:-:310720..314646
Molecular Weight (calculated)
80144.1 Da
IEP (calculated)
5.834
GRAVY (calculated)
-0.064
Length
733 amino acids
Sequence
(BLAST)
001: MAPFGGKSFA DAVSGIGGNG VGRLLAAVAA AMLVRIFSGP GIALLPENDA EDDFSDTEGA GDDSSSSPGK VRPVTIRWRN ITCSLSDKSS KSVRFLLKNV
101: SGEAKPGRLL AIMGPSGSGK TTLLNVLAGQ LSSSPRLHLS GLLEVNGRSS SSRAFKLAFV RQEDLFFSQL TVRETLSFAA ELQLREMSSD EERDEYVNNL
201: LFRLGLVSCA DSCVGDAKVR GISGGEKKRL SLACELIASP SVIFADEPTT GLDAFQAEQV METLRKLAQD GHTVICSIHQ PRGSVYAKFD DVVLLTEGTL
301: VYAGPAGNEP LTYFGNFGFL CPEHVNPAEF LADLISVDYS SSDSVYSSQK RVHALVDAFS QRSSSILYAT PLGVKQETKN SMRPRRNAIV ERKDGWWRQF
401: FLLLKRAWMQ ASRDGPTNKV RARMSVASAL IFGSVFWRMG KSQTSIQDRM GLLQVAAINT AMAALTKTVG VFPKERAIVD RERSKGSYSL GPYLLSKTIA
501: EIPIGAAFPL MFGAVLYPMA RLHPTLSRFG KFCGIMTVES FAASAMGLTV GAMVPNTEAA MAVGPSLMTV FIVFGGYYVN ADNTPIIFRW IPRASLIRWA
601: FQGLCINEFT GLEFDHQNTF DVQTGEQALE RLSFKGSRIR ETIAAQMRIL MFWYCTTYLL LEKNKPKYQK LELLLDNGDT ENPGVQLEPA LDEAEVVDQT
701: EETEDELKQP LDDQSSTSSD EFGEIRPFVL EGL
Best Arabidopsis Sequence Match ( AT2G01320.4 )
(BLAST)
001: MAPFGGKSLA DVVSGIGGNG VGGALAAVAA ALLVRLFAGP GIALLPEDEA EDDYAETEDG GGDSIRPVTI RWRNITCSLS DKSSKSVRFL LKNVSGEAKP
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEGL
Arabidopsis Description
ABCG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSW5]
SUBAcon: [peroxisome,plastid,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.