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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65003 Canola cytosol, peroxisome, plasma membrane 96.77 96.64
CDX76119 Canola cytosol, peroxisome, plasma membrane 76.44 81.71
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 82.19 80.83
CDY40201 Canola cytosol 74.47 75.0
CDY02907 Canola cytosol, peroxisome, plasma membrane 66.48 74.65
CDX67624 Canola cytosol, peroxisome, plasma membrane 73.77 74.4
CDX76121 Canola cytosol 48.39 73.25
CDX73404 Canola plasma membrane 75.74 68.44
CDX74853 Canola plastid 55.54 64.18
CDY44641 Canola plasma membrane 25.81 61.95
CDX69629 Canola plastid 60.87 59.62
CDY09810 Canola plastid 61.01 57.85
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 51.89 54.33
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 51.89 54.33
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 50.77 54.19
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 51.75 54.19
GSMUA_Achr5P28450_001 Banana plasma membrane 53.02 54.15
Os05t0120200-01 Rice plasma membrane 52.88 53.93
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 51.47 53.89
CDX93388 Canola plasma membrane 55.96 53.85
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 53.3 53.82
CDY18451 Canola cytosol, peroxisome, plasma membrane 55.96 53.77
Os05t0120000-00 Rice plasma membrane 51.19 53.68
EES18923 Sorghum cytosol, peroxisome, plasma membrane 53.16 53.08
CDX73549 Canola cytosol, peroxisome, plasma membrane 56.24 53.04
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 50.07 52.89
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 50.07 52.89
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 51.33 52.74
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 51.05 52.6
EES17614 Sorghum cytosol, peroxisome, vacuole 52.31 52.54
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 52.31 52.39
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 51.05 52.0
Zm00001d035553_P001 Maize plasma membrane 51.89 51.82
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 54.0 51.82
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 57.08 51.52
EER95064 Sorghum cytosol, peroxisome, plasma membrane 56.94 51.01
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 53.02 50.74
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 53.86 50.73
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 53.86 50.73
TraesCS3B01G387500.1 Wheat plastid 53.58 50.46
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 53.44 50.4
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 55.96 50.38
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 56.24 50.38
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 53.3 50.26
Os01t0836600-01 Rice plasma membrane 52.59 50.07
Os03t0281900-01 Rice cytosol, plasma membrane 55.26 50.06
Zm00001d042953_P001 Maize plasma membrane 53.16 49.8
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 55.96 47.44
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 50.91 46.01
CDY50899 Canola cytosol 21.32 45.65
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 52.59 41.71
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 36.04 39.18
HORVU5Hr1G021110.1 Barley cytosol 23.28 38.69
HORVU4Hr1G058070.2 Barley cytosol 43.34 37.91
CDY02516 Canola cytosol, peroxisome, plasma membrane 28.33 34.35
CDX76122 Canola plasma membrane 61.29 34.09
Os03t0282100-00 Rice cytosol, nucleus, plastid 36.61 34.07
CDY59400 Canola cytosol, plasma membrane, plastid 28.05 34.01
CDY02906 Canola plasma membrane 61.15 33.93
CDX93119 Canola cytosol, peroxisome, plasma membrane 28.61 33.72
CDX89610 Canola cytosol, peroxisome, plasma membrane 28.61 33.72
CDY13996 Canola plasma membrane 22.58 33.61
CDX96366 Canola cytosol 16.55 31.98
CDY27043 Canola plastid 26.37 31.92
CDX94418 Canola plastid 25.53 31.76
CDX96159 Canola plastid 26.23 31.75
CDY36670 Canola cytosol 16.13 31.68
CDX89396 Canola plasma membrane 25.39 31.59
CDX92533 Canola plastid 27.77 31.48
GSMUA_Achr6P08820_001 Banana plasma membrane 50.21 28.96
CDX68292 Canola cytosol, peroxisome, plasma membrane 25.25 27.69
CDY48079 Canola plastid 25.25 27.07
CDY29837 Canola plasma membrane 24.4 27.02
CDY49155 Canola cytosol, peroxisome, plasma membrane 24.54 26.96
CDX92829 Canola plasma membrane 24.26 26.86
CDX72849 Canola cytosol, peroxisome, plasma membrane 25.67 26.83
CDY51602 Canola plastid 24.96 26.73
CDY47690 Canola cytosol, peroxisome, plastid 23.98 26.68
CDY50951 Canola cytosol, peroxisome, plastid 23.98 26.68
CDY46506 Canola cytosol, peroxisome, plasma membrane 24.96 26.65
CDY03668 Canola plasma membrane 25.39 26.38
CDY29304 Canola cytosol, peroxisome, plasma membrane 23.42 26.18
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 25.11 26.17
CDX89252 Canola cytosol, peroxisome, plasma membrane 23.28 26.02
CDX99764 Canola cytosol, peroxisome, plasma membrane 24.96 25.99
CDX70095 Canola plastid 25.95 25.66
CDY23205 Canola plastid 26.09 25.31
CDY04991 Canola plastid 25.39 25.21
CDX95330 Canola plastid 25.95 25.07
CDX98933 Canola plasma membrane 25.67 24.24
CDY24203 Canola peroxisome 23.14 24.23
CDY14079 Canola plasma membrane 25.53 24.2
CDY12299 Canola cytosol, peroxisome, plasma membrane 24.12 24.16
CDY43362 Canola cytosol, peroxisome, plasma membrane 23.0 24.08
CDY12359 Canola cytosol, nucleus, plasma membrane 9.68 22.92
CDY37372 Canola cytosol, peroxisome, plasma membrane 23.14 22.51
CDY40385 Canola cytosol, peroxisome, plasma membrane 23.14 22.39
CDY36671 Canola plasma membrane 9.96 20.52
CDX96365 Canola plasma membrane 10.8 19.95
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078HJ09UniProt:A0A078HJ09InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY37656ProteinID:CDY37656ProteinID:CDY37656.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00064538001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE625CSEG:seg:
Description
BnaC04g29980DBnaC04g29980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJ09]
Coordinates
chrLK032405:-:237459..239600
Molecular Weight (calculated)
79756.6 Da
IEP (calculated)
8.236
GRAVY (calculated)
0.132
Length
713 amino acids
Sequence
(BLAST)
001: MQRAFEEPHC AISVGSPTLV ELLTDCDSFR KEESSSVARS DDPVHSIIDV EALHVKPVRF VLAFNKLEYN VTFRRWFDFS RPRSSDTVKT LLDDVSGEAC
101: DGNILAVLGA SGAGKSTLID ALAGRVAKES LRGSVTLNGE NVLQSQLLKV ISAYVMQDDL LFPMLTVKET LMFASEFRLP RSFPKSKKME RVQALIDQLG
201: LRNAADTVIG DEGHRGVSGG ERRRVSIGID IIHDPIVLFL DEPTSGLDSS NAFMVVQVLK RIAQSGSVVV MSIHQPSTRI IDLLDRLIIL SRGKNVFSGS
301: PASLPRFFSN LGHTIPEKEN ITEFALDLVR KLEGSTEGTR ELVEFNEKWQ QDSCGLSQSA RPTPQGLSLK EAIIESVSRG KLVSGSSGAT NFTSMETVSS
401: YTNPSLFETF ILAKRYMRNW IRMPELLGTR IAIVMVTAFL LATVYWKLDN TPRGAQERLT FFAFVVPTTF YLCLDNVPVF IQERYIFLRE TTRNAYRTSS
501: YVISHSLVSL PQLIAPSLVF STITFWTVGL RGGLEGYVFY CLIIYASFWS GSSVVTFISG LVPHIMLSYM VTIAYVAYCL LLSGFYVVRD RIPSYWIWFH
601: YISPIKYPYE AVLINEFDDP SRCFVKGVQV FEGTLLGGVS DMKKVELLET LSRSLSTRIT QSTCLRTGPG FLSQQGIPQL SKWDCLWITL ASGLFFRILF
701: YFALLFGSKN KRT
Best Arabidopsis Sequence Match ( AT3G55130.1 )
(BLAST)
001: MNLSLSGRKI AMTRVSAETQ YITPIGSPTL DELLKDCDSF RKGDSGDGVK SDDPAHHIID VEALYVKPVP YVLNFNNLQY DVTLRRRFGF SRQNGVKTLL
101: DDVSGEASDG DILAVLGASG AGKSTLIDAL AGRVAEGSLR GSVTLNGEKV LQSRLLKVIS AYVMQDDLLF PMLTVKETLM FASEFRLPRS LSKSKKMERV
201: EALIDQLGLR NAANTVIGDE GHRGVSGGER RRVSIGIDII HDPIVLFLDE PTSGLDSTNA FMVVQVLKRI AQSGSIVIMS IHQPSARIVE LLDRLIILSR
301: GKSVFNGSPA SLPGFFSDFG RPIPEKENIS EFALDLVREL EGSNEGTKAL VDFNEKWQQN KISLIQSAPQ TNKLDQDRSL SLKEAINASV SRGKLVSGSS
401: RSNPTSMETV SSYANPSLFE TFILAKRYMK NWIRMPELVG TRIATVMVTG CLLATVYWKL DHTPRGAQER LTLFAFVVPT MFYCCLDNVP VFIQERYIFL
501: RETTHNAYRT SSYVISHSLV SLPQLLAPSL VFSAITFWTV GLSGGLEGFV FYCLLIYASF WSGSSVVTFI SGVVPNIMLC YMVSITYLAY CLLLSGFYVN
601: RDRIPFYWTW FHYISILKYP YEAVLINEFD DPSRCFVRGV QVFDSTLLGG VSDSGKVKLL ETLSKSLRTK ITESTCLRTG SDLLAQQGIT QLSKWDCLWI
701: TFASGLFFRI LFYFALLFGS RNKRT
Arabidopsis Description
ABCG19ABC transporter G family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3D6]
SUBAcon: [mitochondrion,peroxisome,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.