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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • plastid 3
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:plastid
PProwler:plastid
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005051.1-P Field mustard plastid 99.35 99.84
CDY44641 Canola plasma membrane 47.65 98.99
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 99.35 82.39
AT2G39350.1 Thale cress cytosol 92.22 76.89
CDX69629 Canola plastid 79.25 67.17
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 76.82 65.47
PGSC0003DMT400029838 Potato extracellular 73.26 65.04
CDY09810 Canola plastid 79.09 64.89
KRG92984 Soybean cytosol, peroxisome, plasma membrane 77.63 63.87
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 76.82 63.45
Solyc05g054890.2.1 Tomato cytosol 76.66 63.07
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 73.91 62.98
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 73.26 62.95
Solyc04g010210.1.1 Tomato extracellular 72.12 62.32
CDX93388 Canola plasma membrane 72.61 60.46
CDY18451 Canola cytosol, peroxisome, plasma membrane 72.61 60.38
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 67.75 59.21
CDY02907 Canola cytosol, peroxisome, plasma membrane 60.29 58.58
Os05t0120200-01 Rice plasma membrane 65.96 58.23
CDY40201 Canola cytosol 66.77 58.19
GSMUA_Achr5P28450_001 Banana plasma membrane 65.64 58.02
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 64.02 58.0
CDX76119 Canola cytosol, peroxisome, plasma membrane 62.4 57.72
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 63.7 57.71
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 63.7 57.71
CDX73549 Canola cytosol, peroxisome, plasma membrane 70.66 57.67
CDX67624 Canola cytosol, peroxisome, plasma membrane 65.8 57.43
EES18923 Sorghum cytosol, peroxisome, plasma membrane 66.45 57.42
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 63.37 57.42
Os05t0120000-00 Rice plasma membrane 63.21 57.35
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 64.51 57.35
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 64.02 57.08
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 65.8 57.02
Zm00001d035553_P001 Maize plasma membrane 65.96 57.0
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 64.51 56.86
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 68.23 56.66
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 68.23 56.51
Os01t0836600-01 Rice plasma membrane 68.07 56.07
EES17614 Sorghum cytosol, peroxisome, vacuole 64.51 56.06
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 68.72 56.01
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 68.72 56.01
TraesCS3B01G387500.1 Wheat plastid 68.72 56.01
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 60.62 55.99
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 68.56 55.95
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 68.56 55.95
CDX76121 Canola cytosol 42.63 55.84
CDY65003 Canola cytosol, peroxisome, plasma membrane 64.34 55.6
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 71.15 55.57
CDY37656 Canola cytosol, peroxisome, plasma membrane 64.18 55.54
Zm00001d042953_P001 Maize plasma membrane 68.07 55.19
EER95064 Sorghum cytosol, peroxisome, plasma membrane 70.83 54.9
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 59.81 54.67
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 69.85 54.42
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 69.85 54.15
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 59.0 53.93
Os03t0281900-01 Rice cytosol, plasma membrane 67.91 53.24
CDX73404 Canola plasma membrane 67.1 52.47
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 69.85 51.25
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 64.34 50.32
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 66.94 45.94
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 46.35 43.6
CDY50899 Canola cytosol 22.53 41.74
CDX76122 Canola plasma membrane 85.25 41.03
CDY02906 Canola plasma membrane 85.25 40.93
HORVU4Hr1G058070.2 Barley cytosol 52.67 39.88
HORVU5Hr1G021110.1 Barley cytosol 24.64 35.43
CDY13996 Canola plasma membrane 27.39 35.28
CDX89610 Canola cytosol, peroxisome, plasma membrane 33.39 34.05
CDX93119 Canola cytosol, peroxisome, plasma membrane 33.23 33.88
CDY02516 Canola cytosol, peroxisome, plasma membrane 32.09 33.67
CDY59400 Canola cytosol, plasma membrane, plastid 31.44 32.99
CDX94418 Canola plastid 29.82 32.11
CDX89396 Canola plasma membrane 29.5 31.76
CDY27043 Canola plastid 30.31 31.75
CDX96159 Canola plastid 29.98 31.41
CDX92533 Canola plastid 31.6 31.0
Os03t0282100-00 Rice cytosol, nucleus, plastid 37.6 30.29
GSMUA_Achr6P08820_001 Banana plasma membrane 60.29 30.1
CDX96366 Canola cytosol 17.34 29.0
CDY36670 Canola cytosol 16.86 28.65
CDX68292 Canola cytosol, peroxisome, plasma membrane 28.69 27.23
CDX72849 Canola cytosol, peroxisome, plasma membrane 28.85 26.1
CDY29837 Canola plasma membrane 26.58 25.47
CDY03668 Canola plasma membrane 28.2 25.36
CDX92829 Canola plasma membrane 26.42 25.31
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 28.04 25.29
CDY48079 Canola plastid 26.58 24.66
CDY47690 Canola cytosol, peroxisome, plastid 25.61 24.65
CDY50951 Canola cytosol, peroxisome, plastid 25.61 24.65
CDY51602 Canola plastid 26.58 24.62
CDY29304 Canola cytosol, peroxisome, plasma membrane 25.45 24.61
CDY46506 Canola cytosol, peroxisome, plasma membrane 26.58 24.55
CDX89252 Canola cytosol, peroxisome, plasma membrane 25.28 24.45
CDY49155 Canola cytosol, peroxisome, plasma membrane 25.61 24.35
CDX70095 Canola plastid 27.71 23.72
CDX99764 Canola cytosol, peroxisome, plasma membrane 26.26 23.65
CDY04991 Canola plastid 27.23 23.4
CDY12359 Canola cytosol, nucleus, plasma membrane 11.18 22.92
CDX98933 Canola plasma membrane 27.55 22.52
CDY14079 Canola plasma membrane 27.39 22.47
CDY24203 Canola peroxisome 24.8 22.47
CDY23205 Canola plastid 26.74 22.45
CDY43362 Canola cytosol, peroxisome, plasma membrane 24.64 22.32
CDX95330 Canola plastid 26.58 22.22
CDY12299 Canola cytosol, peroxisome, plasma membrane 25.61 22.19
CDY36671 Canola plasma membrane 12.32 21.97
CDX96365 Canola plasma membrane 13.29 21.24
CDY37372 Canola cytosol, peroxisome, plasma membrane 24.31 20.46
CDY40385 Canola cytosol, peroxisome, plasma membrane 24.31 20.35
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078CIH3InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX74853ProteinID:CDX74853ProteinID:CDX74853.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0007275GO:GO:0008150GO:GO:0009605GO:GO:0009607GO:GO:0009624GO:GO:0009653
GO:GO:0009987GO:GO:0010208GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00116842001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF428SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EF25B0SEG:seg:::
Description
BnaA05g05990D
Coordinates
chrLK031802:+:1040848..1042781
Molecular Weight (calculated)
68215.5 Da
IEP (calculated)
10.129
GRAVY (calculated)
0.249
Length
617 amino acids
Sequence
(BLAST)
001: MAVLGASGSG KSTLIDALAN RIAKGSLKGT VKLNGETLQS RTLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK SKKKLRVQAL IEQLGIKNAA
101: KTIIGDEGHR GISGGERRRV SIGIDIIHDP ILLFLDEPTS GLDSTSAYMV VKVLKRIAQS GSIVIMSIHQ PSHRVLGLLN RLIFLSRGNT VFSGSPGSLP
201: RFFAEFGSPI PENENRTEFA LDLIRELEGS AGGTRGLIEF NKKWQEMKKE NNRQPPLTPP ASPYPNLTLK EAIAASISRG KLVSGGESAA ISTSTAATTL
301: TVPAFANSIW IEIVTLSKRS MLNSRRQPEL FGIRLASVVI TGFILATVFW RIDNSPKGVQ ERLGFFAFAM STMFYTCAEA LPVFLQERYI FMRETAYNAY
401: RRSSYVLSHA IVAFPSLIFL SVAFAATTFW AVGLDGGPMG FLFYCLIILA SFWSGSSFVT FLSGIVPHVM LGYTIVVAIL AYFLLFSGFF INRNRIPDYW
501: IWFHYMSLVK YPYEAVLQNE FSDATKCFVR GVQIFDNTPL GVLPEGMKLR LLDSVSRSLG TTISSSTCLT TGADILTQQG VTQLSKWNCL LITVGFGFFF
601: RALFYFCLLL GSKNKRR
Best Arabidopsis Sequence Match ( AT2G39350.1 )
(BLAST)
001: MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ
101: TARPKTKTLL NNISGETRDG EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP MLTVEETLMF AAEFRLPRSL
201: PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL
301: LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS
401: RGKLVSGGES VAHGGATTNT TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK GVQERLGFFA FAMSTMFYTC
501: ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV
601: AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR
701: QQGVVQLSKW NCLFITVAFG FFFRILFYFT LLLGSKNKRR
Arabidopsis Description
ABCG1ABC transporter G family member 1 [Source:UniProtKB/Swiss-Prot;Acc:O80946]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.