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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 99.43 99.43
CDY40201 Canola cytosol 90.52 90.4
CDY02907 Canola cytosol, peroxisome, plasma membrane 76.8 85.51
CDX76121 Canola cytosol 55.45 83.23
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 83.31 83.19
CDX73404 Canola plasma membrane 91.65 82.13
CDX76119 Canola cytosol, peroxisome, plasma membrane 72.56 76.91
CDY65003 Canola cytosol, peroxisome, plasma membrane 74.54 73.81
CDY37656 Canola cytosol, peroxisome, plasma membrane 74.4 73.77
CDX74853 Canola plastid 57.43 65.8
CDY44641 Canola plasma membrane 27.3 64.98
CDX69629 Canola plastid 63.65 61.81
CDY09810 Canola plastid 63.51 59.71
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.45 57.56
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.3 57.42
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.16 57.27
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 56.58 56.66
GSMUA_Achr5P28450_001 Banana plasma membrane 55.87 56.59
CDX93388 Canola plasma membrane 59.12 56.41
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 54.17 56.24
CDY18451 Canola cytosol, peroxisome, plasma membrane 58.98 56.2
Os05t0120200-01 Rice plasma membrane 55.45 56.08
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 54.74 55.92
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 54.74 55.76
Os05t0120000-00 Rice plasma membrane 53.47 55.59
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 54.74 55.29
EES17614 Sorghum cytosol, peroxisome, vacuole 55.16 54.93
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 52.33 54.81
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 51.77 54.79
EES18923 Sorghum cytosol, peroxisome, plasma membrane 55.02 54.48
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 51.63 54.07
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 54.46 54.07
CDX73549 Canola cytosol, peroxisome, plasma membrane 57.57 53.84
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 59.97 53.67
Zm00001d035553_P001 Maize plasma membrane 54.17 53.64
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 56.01 53.3
EER95064 Sorghum cytosol, peroxisome, plasma membrane 59.69 53.02
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 55.45 52.62
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 56.29 52.58
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 56.29 52.58
Os01t0836600-01 Rice plasma membrane 55.45 52.34
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 55.87 52.25
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 55.87 52.25
TraesCS3B01G387500.1 Wheat plastid 55.87 52.18
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 58.42 52.15
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 58.56 52.01
Zm00001d042953_P001 Maize plasma membrane 55.59 51.64
Os03t0281900-01 Rice cytosol, plasma membrane 56.86 51.08
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 58.42 49.11
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 54.17 48.54
CDY50899 Canola cytosol 21.22 45.05
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 55.02 43.27
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 37.2 40.09
HORVU5Hr1G021110.1 Barley cytosol 23.9 39.39
HORVU4Hr1G058070.2 Barley cytosol 43.71 37.91
CDY02516 Canola cytosol, peroxisome, plasma membrane 29.0 34.86
CDX76122 Canola plasma membrane 62.8 34.63
CDY02906 Canola plasma membrane 62.8 34.55
CDY59400 Canola cytosol, plasma membrane, plastid 28.57 34.35
CDX93119 Canola cytosol, peroxisome, plasma membrane 29.28 34.21
CDX89610 Canola cytosol, peroxisome, plasma membrane 29.28 34.21
Os03t0282100-00 Rice cytosol, nucleus, plastid 37.06 34.2
CDY13996 Canola plasma membrane 23.06 34.03
CDX94418 Canola plastid 26.73 32.98
CDY27043 Canola plastid 27.44 32.94
CDX89396 Canola plasma membrane 26.59 32.81
CDX92533 Canola plastid 28.71 32.27
CDX96159 Canola plastid 26.87 32.26
CDX96366 Canola cytosol 16.83 32.25
CDY36670 Canola cytosol 16.55 32.23
GSMUA_Achr6P08820_001 Banana plasma membrane 51.77 29.61
CDX92829 Canola plasma membrane 25.74 28.26
CDY29837 Canola plasma membrane 25.6 28.11
CDX68292 Canola cytosol, peroxisome, plasma membrane 25.74 28.0
CDY48079 Canola plastid 26.03 27.67
CDX72849 Canola cytosol, peroxisome, plasma membrane 26.59 27.57
CDY49155 Canola cytosol, peroxisome, plasma membrane 25.18 27.43
CDY51602 Canola plastid 25.74 27.33
CDY46506 Canola cytosol, peroxisome, plasma membrane 25.74 27.25
CDY29304 Canola cytosol, peroxisome, plasma membrane 24.47 27.12
CDY03668 Canola plasma membrane 26.31 27.11
CDY50951 Canola cytosol, peroxisome, plastid 24.47 26.99
CDY47690 Canola cytosol, peroxisome, plastid 24.47 26.99
CDX89252 Canola cytosol, peroxisome, plasma membrane 24.33 26.96
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 26.03 26.9
CDX99764 Canola cytosol, peroxisome, plasma membrane 25.88 26.72
CDX70095 Canola plastid 26.17 25.66
CDY04991 Canola plastid 25.88 25.49
CDY23205 Canola plastid 26.31 25.31
CDX95330 Canola plastid 26.31 25.2
CDY14079 Canola plasma membrane 26.45 24.87
CDY12299 Canola cytosol, peroxisome, plasma membrane 24.89 24.72
CDX98933 Canola plasma membrane 26.17 24.5
CDY24203 Canola peroxisome 23.48 24.38
CDY43362 Canola cytosol, peroxisome, plasma membrane 23.34 24.23
CDY12359 Canola cytosol, nucleus, plasma membrane 10.18 23.92
CDY37372 Canola cytosol, peroxisome, plasma membrane 24.47 23.6
CDY40385 Canola cytosol, peroxisome, plasma membrane 24.47 23.47
CDY36671 Canola plasma membrane 10.33 21.1
CDX96365 Canola plasma membrane 11.46 20.98
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078BVB4InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX67624ProteinID:CDX67624ProteinID:CDX67624.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00098777001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EDF0B3SEG:seg:::
Description
BnaA07g16640D
Coordinates
chrLK031787:-:1315952..1318996
Molecular Weight (calculated)
78746.4 Da
IEP (calculated)
8.253
GRAVY (calculated)
0.092
Length
707 amino acids
Sequence
(BLAST)
001: MPRVSATSQE ISPQGGNESP TLGELLKHFD DGDRKKHSGE EASFHHILDL ASPELRPVPF LLSFNNLSYD VKVRRRFNFS SPAPVKTLLD GVSGEACNGD
101: ILAVLGASGA GKSTLIDALA GRVSNLRGTV TLNGEKILQT RLLKVISAYV MQDDLLFPML TVEETLMFAS EFRLPRSLSK SKKTERVETL IDQLGLRNAA
201: DTIIGDEGHR GVSGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTNAFMV VQVLRRIARS GSIVIMSIHQ PSARVIDLLD RLIILSRGKS VFNGSPTSLP
301: TFLSDFGHPV PEKENITEFT LDLVRKLEGS TEGARELVEF NEKWQHNQSA RATPMTTPYQ ALSLKESITA SVSRGKLVSG STSSNPISME SVSSYANSPL
401: VETFILAKRY MKNWMRTPEL MGTRIATVMV TGLLLATVYW RLDNTPRGAQ ERMSFVAYGM STMFYVCADS VPAFIQERFI FLRETTRNAY RTSSYVISHS
501: LVSLPQLLAL SIAFAATTFW TVGLSGGLES FFFYCLIIYA GFWSGSSFVT FVSGLVPNVM ISFMITIAYL SYCLLMGGFY INRDRIPIYW IWFHYISLLK
601: YPYEAVLINE FDDPSRCFVR GVQVFDGTLL AKVPEAMKVK LLDTMSDSLG TNITESTCLR TGPDLLLQQG ISQLSKWDCL WITLAWGLFF RILFYFSLLF
701: GSKNKRT
Best Arabidopsis Sequence Match ( AT3G55110.1 )
(BLAST)
001: MPRVSAEILD ISHTGGNESP TLGELLKDFN DSGRKKYPGE NAPTQHILDL APAAETRSVP FLLSFNNLSY NVVLRRRFDF SRRKTASVKT LLDDITGEAR
101: DGEILAVLGG SGAGKSTLID ALAGRVAEDS LKGTVTLNGE KVLQSRLLKV ISAYVMQDDL LFPMLTVKET LMFASEFRLP RSLPKSKKME RVETLIDQLG
201: LRNAADTVIG DEGHRGVSGG ERRRVSIGID IIHDPILLFL DEPTSGLDST NAFMVVQVLK RIAQSGSVVI MSIHQPSARI IGLLDRLIIL SHGKSVFNGS
301: PVSLPSFFSS FGRPIPEKEN ITEFALDVIR ELEGSSEGTR DLVEFNEKWQ QNQTARATTQ SRVSLKEAIA ASVSRGKLVS GSSGANPISM ETVSSYANPP
401: LAETFILAKR YIKNWIRTPE LIGMRIGTVM VTGLLLATVY WRLDNTPRGA QERMGFFAFG MSTMFYCCAD NIPVFIQERY IFLRETTHNA YRTSSYVISH
501: ALVSLPQLLA LSIAFAATTF WTVGLSGGLE SFFYYCLIIY AAFWSGSSIV TFISGLIPNV MMSYMVTIAY LSYCLLLGGF YINRDRIPLY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV KGVQVFDGTL LAEVSHVMKV KLLDTLSGSL GTKITESTCL RTGPDLLMQQ GITQLSKWDC LWITLAWGLF FRILFYLSLL
701: FGSKNKRT
Arabidopsis Description
ABCG18ABC transporter G family member 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.