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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 99.01 99.01
CDX67624 Canola cytosol, peroxisome, plasma membrane 90.4 90.52
CDX73404 Canola plasma membrane 97.88 87.83
CDY02907 Canola cytosol, peroxisome, plasma membrane 77.82 86.77
CDX76121 Canola cytosol 56.36 84.71
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 84.46 84.46
CDX76119 Canola cytosol, peroxisome, plasma membrane 72.18 76.61
CDY65003 Canola cytosol, peroxisome, plasma membrane 75.14 74.51
CDY37656 Canola cytosol, peroxisome, plasma membrane 75.0 74.47
CDX74853 Canola plastid 58.19 66.77
CDY44641 Canola plasma membrane 27.68 65.99
CDX69629 Canola plastid 64.12 62.36
CDY09810 Canola plastid 63.98 60.24
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.93 58.15
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.65 57.86
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.65 57.86
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 55.65 56.94
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 54.52 56.68
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 55.51 56.63
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 55.93 56.57
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 56.36 56.52
GSMUA_Achr5P28450_001 Banana plasma membrane 55.65 56.45
CDX93388 Canola plasma membrane 59.04 56.41
Os05t0120200-01 Rice plasma membrane 55.65 56.37
CDY18451 Canola cytosol, peroxisome, plasma membrane 59.04 56.33
Os05t0120000-00 Rice plasma membrane 53.67 55.88
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 52.12 55.24
EES17614 Sorghum cytosol, peroxisome, vacuole 54.52 54.37
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 54.66 54.35
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 51.69 54.22
EES18923 Sorghum cytosol, peroxisome, plasma membrane 54.52 54.06
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 51.41 53.93
CDX73549 Canola cytosol, peroxisome, plasma membrane 57.34 53.7
Zm00001d035553_P001 Maize plasma membrane 54.1 53.64
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 55.93 53.3
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 59.46 53.29
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 55.79 53.02
EER95064 Sorghum cytosol, peroxisome, plasma membrane 59.32 52.76
Os01t0836600-01 Rice plasma membrane 55.37 52.34
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 55.79 52.18
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 55.79 52.18
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 55.37 51.85
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 55.37 51.85
TraesCS3B01G387500.1 Wheat plastid 55.37 51.78
Zm00001d042953_P001 Maize plasma membrane 55.51 51.64
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 57.63 51.52
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 57.63 51.26
Os03t0281900-01 Rice cytosol, plasma membrane 56.5 50.83
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 55.08 49.43
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 57.63 48.51
CDY50899 Canola cytosol 21.61 45.95
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 55.23 43.49
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 37.71 40.7
HORVU5Hr1G021110.1 Barley cytosol 24.29 40.09
HORVU4Hr1G058070.2 Barley cytosol 43.64 37.91
CDY02516 Canola cytosol, peroxisome, plasma membrane 30.37 36.56
CDY59400 Canola cytosol, plasma membrane, plastid 29.94 36.05
CDX89610 Canola cytosol, peroxisome, plasma membrane 29.66 34.71
CDX93119 Canola cytosol, peroxisome, plasma membrane 29.66 34.71
CDY13996 Canola plasma membrane 23.31 34.45
CDX76122 Canola plasma membrane 62.29 34.4
CDY02906 Canola plasma membrane 62.29 34.32
Os03t0282100-00 Rice cytosol, nucleus, plastid 36.72 33.94
CDX94418 Canola plastid 26.98 33.33
CDY27043 Canola plastid 27.68 33.28
CDX89396 Canola plasma membrane 26.84 33.16
CDX92533 Canola plastid 29.24 32.91
CDX96159 Canola plastid 27.12 32.6
CDY36670 Canola cytosol 15.82 30.85
CDX96366 Canola cytosol 15.96 30.62
GSMUA_Achr6P08820_001 Banana plasma membrane 51.13 29.29
CDY48079 Canola plastid 25.99 27.67
CDX92829 Canola plasma membrane 25.0 27.48
CDY29837 Canola plasma membrane 24.86 27.33
CDY51602 Canola plastid 25.71 27.33
CDX68292 Canola cytosol, peroxisome, plasma membrane 25.0 27.23
CDY49155 Canola cytosol, peroxisome, plasma membrane 24.86 27.12
CDY46506 Canola cytosol, peroxisome, plasma membrane 25.57 27.1
CDY47690 Canola cytosol, peroxisome, plastid 24.29 26.83
CDY50951 Canola cytosol, peroxisome, plastid 24.29 26.83
CDY29304 Canola cytosol, peroxisome, plasma membrane 24.15 26.8
CDX72849 Canola cytosol, peroxisome, plasma membrane 25.71 26.69
CDX89252 Canola cytosol, peroxisome, plasma membrane 24.01 26.65
CDX99764 Canola cytosol, peroxisome, plasma membrane 25.71 26.57
CDY03668 Canola plasma membrane 25.42 26.24
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 25.28 26.17
CDX70095 Canola plastid 25.85 25.38
CDY23205 Canola plastid 26.27 25.31
CDX95330 Canola plastid 26.27 25.2
CDY04991 Canola plastid 25.42 25.07
CDY12359 Canola cytosol, nucleus, plasma membrane 10.59 24.92
CDY14079 Canola plasma membrane 25.99 24.47
CDY12299 Canola cytosol, peroxisome, plasma membrane 24.58 24.44
CDX98933 Canola plasma membrane 25.85 24.24
CDY24203 Canola peroxisome 22.88 23.79
CDY43362 Canola cytosol, peroxisome, plasma membrane 22.74 23.64
CDY37372 Canola cytosol, peroxisome, plasma membrane 23.59 22.78
CDY40385 Canola cytosol, peroxisome, plasma membrane 23.59 22.66
CDX96365 Canola plasma membrane 11.3 20.73
CDY36671 Canola plasma membrane 10.03 20.52
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078HR79UniProt:A0A078HR79InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY40201ProteinID:CDY40201ProteinID:CDY40201.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00069344001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE1BA7SEG:seg:
Description
BnaA09g34830DBnaA09g34830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR79]
Coordinates
chrLK032466:-:17464..19700
Molecular Weight (calculated)
78898.7 Da
IEP (calculated)
8.050
GRAVY (calculated)
0.091
Length
708 amino acids
Sequence
(BLAST)
001: MPRVSAESQE ISFDGGNEPT LGELLKDFDG GDRKKNSGED ASTHHILDLT SPETRPVPFL LSFNNLSYDI VHRRRFDFSR GKPASVKPLL NDVSGEACDG
101: DILAVLGASG AGKSTLIDAL AGRVGSLRGT VTLNGEKILQ TRLLKVISAY VMQDDLLFPM LTVKETLMFA SEFRLPRSLS KSKKMERVQT LIDKLGLRNA
201: ADTIIGDEGH RGVSGGERRR VSIGIDIIHD PILLFLDEPT SGLDSTNAFM VVQVLKRIAR SGSIVIMTIH QPSARVLDLL DRLIILSRGE NVFSGSPTSL
301: PQFLSDFGHP IPEKENITEF ALDLVRQLEG SSEGTRELVE FNEKWQQNHS ARATPMTTPY QALSLKESIT ASVSRGKLVS GSTSSDPISM DSVSSYANPP
401: LVETFILAKR YMKNWIRTPE LIGTRIATVM VTGLLLATIY WRLDNTPRGA QERMAFFAFG MSTMFYVCAD NVPVFLKERF IFLRESTRNA YRISSYVISH
501: SLVSLPQLLA LSIAFAATTF WTVGLSGGLE SFLYYCLIIY AGFWSGSSFV TFVSGLVPNV MISFMITIAY LSYCLLLGGF YINRDRIPVY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV RGVQVFDGTL LAKMPDAMKV KLLDTLSNSL GTTITESTCL RTGPDLLMQQ GISQLSKWDC LWITLAWGLF FRILFYFSLL
701: FGSKNKRT
Best Arabidopsis Sequence Match ( AT3G55110.1 )
(BLAST)
001: MPRVSAEILD ISHTGGNESP TLGELLKDFN DSGRKKYPGE NAPTQHILDL APAAETRSVP FLLSFNNLSY NVVLRRRFDF SRRKTASVKT LLDDITGEAR
101: DGEILAVLGG SGAGKSTLID ALAGRVAEDS LKGTVTLNGE KVLQSRLLKV ISAYVMQDDL LFPMLTVKET LMFASEFRLP RSLPKSKKME RVETLIDQLG
201: LRNAADTVIG DEGHRGVSGG ERRRVSIGID IIHDPILLFL DEPTSGLDST NAFMVVQVLK RIAQSGSVVI MSIHQPSARI IGLLDRLIIL SHGKSVFNGS
301: PVSLPSFFSS FGRPIPEKEN ITEFALDVIR ELEGSSEGTR DLVEFNEKWQ QNQTARATTQ SRVSLKEAIA ASVSRGKLVS GSSGANPISM ETVSSYANPP
401: LAETFILAKR YIKNWIRTPE LIGMRIGTVM VTGLLLATVY WRLDNTPRGA QERMGFFAFG MSTMFYCCAD NIPVFIQERY IFLRETTHNA YRTSSYVISH
501: ALVSLPQLLA LSIAFAATTF WTVGLSGGLE SFFYYCLIIY AAFWSGSSIV TFISGLIPNV MMSYMVTIAY LSYCLLLGGF YINRDRIPLY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV KGVQVFDGTL LAEVSHVMKV KLLDTLSGSL GTKITESTCL RTGPDLLMQQ GITQLSKWDC LWITLAWGLF FRILFYLSLL
701: FGSKNKRT
Arabidopsis Description
ABCG18ABC transporter G family member 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.