CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02516	Canola	cytosol, peroxisome, plasma membrane	97.96	97.96
AT1G53270.1	Thale cress	plasma membrane	93.03	92.71
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	66.33	63.62
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	64.12	61.8
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	63.61	61.21
PGSC0003DMT400032370	Potato	plasma membrane	63.44	60.16
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	63.1	59.74
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	38.95	55.31
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	44.73	51.87
TraesCS3B01G251300.1	Wheat	plastid	52.72	51.24
TraesCS3A01G221400.1	Wheat	plastid	52.72	51.24
HORVU3Hr1G054160.1	Barley	plastid	52.89	51.15
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	52.55	51.07
Os01t0615500-00	Rice	plastid	51.87	49.76
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	51.19	49.43
EES03276	Sorghum	mitochondrion	51.02	49.02
CDX89610	Canola	cytosol, peroxisome, plasma membrane	47.79	46.45
CDX93119	Canola	cytosol, peroxisome, plasma membrane	47.79	46.45
CDX94418	Canola	plastid	41.84	42.93
CDX89396	Canola	plasma membrane	41.67	42.76
CDY13996	Canola	plasma membrane	34.01	41.75
CDX96159	Canola	plastid	41.5	41.43
CDY27043	Canola	plastid	41.5	41.43
CDX92533	Canola	plastid	41.16	38.47
CDX76121	Canola	cytosol	26.19	32.7
CDY02907	Canola	cytosol, peroxisome, plasma membrane	34.52	31.97
CDX74853	Canola	plastid	32.99	31.44
CDY44641	Canola	plasma membrane	15.65	30.98
CDY40201	Canola	cytosol	36.05	29.94
CDX76119	Canola	cytosol, peroxisome, plasma membrane	33.84	29.84
CDX69629	Canola	plastid	35.54	28.71
CDX67624	Canola	cytosol, peroxisome, plasma membrane	34.35	28.57
CDY37656	Canola	cytosol, peroxisome, plasma membrane	34.01	28.05
CDY65003	Canola	cytosol, peroxisome, plasma membrane	34.01	28.01
CDY09810	Canola	plastid	35.54	27.79
CDY36670	Canola	cytosol	17.01	27.55
CDY18451	Canola	cytosol, peroxisome, plasma membrane	34.69	27.49
CDX93388	Canola	plasma membrane	34.52	27.4
CDX73404	Canola	plasma membrane	36.39	27.12
CDX73549	Canola	cytosol, peroxisome, plasma membrane	34.86	27.12
CDY50899	Canola	cytosol	14.97	26.43
CDX96366	Canola	cytosol	16.33	26.02
CDY49155	Canola	cytosol, peroxisome, plasma membrane	28.4	25.73
CDY50951	Canola	cytosol, peroxisome, plastid	27.72	25.43
CDY47690	Canola	cytosol, peroxisome, plastid	27.72	25.43
CDY29304	Canola	cytosol, peroxisome, plasma membrane	27.38	25.24
CDX89252	Canola	cytosol, peroxisome, plasma membrane	27.21	25.08
CDY46506	Canola	cytosol, peroxisome, plasma membrane	28.23	24.85
CDY48079	Canola	plastid	27.89	24.66
CDY51602	Canola	plastid	27.72	24.47
CDX99764	Canola	cytosol, peroxisome, plasma membrane	28.4	24.38
CDX92829	Canola	plasma membrane	26.7	24.38
CDY12359	Canola	cytosol, nucleus, plasma membrane	12.41	24.25
CDY29837	Canola	plasma membrane	26.36	24.07
CDX68292	Canola	cytosol, peroxisome, plasma membrane	26.02	23.54
CDY12299	Canola	cytosol, peroxisome, plasma membrane	28.23	23.31
CDY23205	Canola	plastid	28.74	22.99
CDX72849	Canola	cytosol, peroxisome, plasma membrane	26.53	22.87
CDX70095	Canola	plastid	27.89	22.75
CDY04991	Canola	plastid	27.55	22.56
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	26.19	22.51
CDY03668	Canola	plasma membrane	26.19	22.45
CDX95330	Canola	plastid	28.06	22.36
CDY24203	Canola	peroxisome	25.85	22.32
CDY43362	Canola	cytosol, peroxisome, plasma membrane	25.68	22.17
CDX98933	Canola	plasma membrane	28.06	21.85
CDY14079	Canola	plasma membrane	27.89	21.81
CDY37372	Canola	cytosol, peroxisome, plasma membrane	26.87	21.56
CDY40385	Canola	cytosol, peroxisome, plasma membrane	26.87	21.44
CDX96365	Canola	plasma membrane	12.07	18.39
CDY36671	Canola	plasma membrane	10.71	18.21
CDY02906	Canola	plasma membrane	35.88	16.42
CDX76122	Canola	plasma membrane	35.37	16.22

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078J7X5	UniProt:A0A078J7X5	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY59400	ProteinID:CDY59400	ProteinID:CDY59400.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00026042001	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF441	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EE64B2	SEG:seg

Description

BnaC03g78180DBnaC03g78180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7X5]

Coordinates

chrLK033759:-:38173..39939

Molecular Weight (calculated)

66038.7 Da

IEP (calculated)

9.365

GRAVY (calculated)

0.072

Length

588 amino acids

Sequence
(BLAST)

001: MELPVKAPVS GGRKISYKLE TKNLSYRLYG KTSKFSNLCG LLNEKEEKVI LKDVSCDARS GEITAIAGPS GAGKTTLLEI LAGKVSQGED SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTN RKEAEAKVKK LMEELGLEHV ADSRIGEGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVMLLKDMTI KQGKTIVLTI HQPGFRILEQ INRIVLLSSG LVVQNGSVNS LYQKIKFSGH QIPRRVNVLE YAIDIAGSLE PVMTQSCREI
301: SCYGHGKTWK SNNAGREFHQ SDSHSNSVLE EVQILGQRSC KNIFRTKQLF TTRALQASIA GLILGSIYLN VGNQKQEGRV LRTGFFAFTL TFLLSSTTEG
401: LPIFLQDRRI LMRETSRRAY RVLSYVLADT LIFIPFLLII SMLFATPVYW LVGLRRELDG FLYFSLVIWI VLLMSNSFVA CFSALVPNFI MGTSVISGLM
501: GSFFLFSGYF IAKDRIPVYW EFMHYLSLFK YPFECLMINE YRGDVFLKEQ DLEESQKWSN LGIMASFIVG YRVLGFFILW YRCCRTKS

Best Arabidopsis Sequence Match ( AT1G53270.1 )
(BLAST)

001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS

Arabidopsis Description

ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.