Factsheet for Solyc07g062630.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032370	Potato	plasma membrane	97.91	98.06
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	68.28	69.51
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	67.95	69.07
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	67.63	68.52
AT1G53270.1	Thale cress	plasma membrane	60.39	63.56
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.9	63.27
CDY02516	Canola	cytosol, peroxisome, plasma membrane	59.9	63.27
CDY59400	Canola	cytosol, plasma membrane, plastid	59.74	63.1
Solyc07g053300.1.1	Tomato	cytosol	57.97	59.21
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	38.65	57.97
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	52.66	54.05
TraesCS3B01G251300.1	Wheat	plastid	52.66	54.05
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	44.12	54.04
HORVU3Hr1G054160.1	Barley	plastid	52.82	53.95
TraesCS3A01G221400.1	Wheat	plastid	52.5	53.88
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	51.85	52.87
Os01t0615500-00	Rice	plastid	52.17	52.85
EES03276	Sorghum	mitochondrion	51.69	52.45
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	47.18	47.72
Solyc03g007690.1.1	Tomato	plastid	39.45	41.04
Solyc03g113690.1.1	Tomato	plastid	43.0	40.58
Solyc04g010210.1.1	Tomato	extracellular	35.75	31.09
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	35.43	30.64
Solyc09g005970.1.1	Tomato	plasma membrane	36.39	30.62
Solyc05g054890.2.1	Tomato	cytosol	35.43	29.33
Solyc11g018690.1.1	Tomato	cytosol	15.62	28.36
Solyc09g098410.1.1	Tomato	nucleus	32.53	27.71
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	27.21	27.57
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	27.86	27.46
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	27.7	27.39
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	27.21	26.16
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	27.54	26.11
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	27.05	24.89
Solyc01g097430.2.1	Tomato	cytosol, nucleus	31.56	23.39
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	10.79	23.1
Solyc05g008350.2.1	Tomato	nucleus, plastid	26.09	22.82
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	26.41	22.71
Solyc01g006720.2.1	Tomato	plastid	26.41	22.65
Solyc07g065780.1.1	Tomato	mitochondrion	14.17	19.78

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
UniProt:K4CGU6	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF441	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc07g062630.1	EnsemblPlants:Solyc07g062630.1.1
TMHMM:TMhelix	UniParc:UPI000276B845	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:-:65319522..65321387

Molecular Weight (calculated)

69058.7 Da

IEP (calculated)

8.653

GRAVY (calculated)

0.204

Length

621 amino acids

Sequence
(BLAST)

001: MELPVSTPDS GGKKKGSYTI ETRNLSYALP TSLYDEVSGI FCCKNPKRPQ KFIIKDVNCE ARPGEITAIA GPSGAGKTTL LEILAGKISP TKVTGEVLVN
101: GHPVNAKCFR RLSGYVTQED ALFPLLTVEE TLMYSALLRL QGGKKEAANR VGVLIKELGL EQVAGARVGR GANRGISGGE RRRVSIGVEL VHDPAVILID
201: EPTSGLDSAS ALHVISLLQV MVAHQGKTIV LTIHQPGFRI LELFDRLVLL SNGGVLHNGS LEHLEERIKF SGLQIPPHIN VLEFAIDVTG SIVIQTSETP
301: NVHFHIKDQG EKKESLRKDD EGFTVSNHND MVDKCPSYAN SYVEEISILG GRFCKNIFRT KQLFATRIIQ ALVAGFILGS IFMNADNNLG QVALQTRLGF
401: FAFSLTFLLS TMTEGLPIFL QERTIFMRET SRGAYRVSSY VVANTIVFLP FLLMVGLLYT VPVYWLVGLR GSMDGFLYFA MVVWIVLLMS NSFTACFSAL
501: VPTFIMGTSI IAGLMGSFFL FSGYFLSKEK IPSYWIFMHY LSLFKYPFEC FLINEYGGKG GKRCLESERG ECKLFAIDFL KQQDLKESLK WTNLAVMLSF
601: ILGYRVLCYL ILWCRCYRTR N

Best Arabidopsis Sequence Match ( AT1G53270.1 )
(BLAST)

001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS

Arabidopsis Description

ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.