Factsheet for Solyc07g065780.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
peroxisome 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46415	Soybean	plasma membrane	62.25	56.65
VIT_19s0015g00960.t01	Wine grape	peroxisome	79.1	51.31
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	75.51	49.27
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	75.51	48.98
KRH14200	Soybean	cytosol	75.06	48.69
OQU76682	Sorghum	mitochondrion, plasma membrane	63.15	47.23
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.91	46.99
CDY43362	Canola	cytosol, peroxisome, plasma membrane	71.91	46.99
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	72.13	46.86
CDY24203	Canola	peroxisome	71.69	46.84
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	64.72	43.31
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	64.49	43.29
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	64.49	43.29
TraesCS7D01G375300.1	Wheat	cytosol, peroxisome, plasma membrane	64.27	43.14
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	64.94	42.75
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	64.49	41.41
TraesCS7A01G378500.2	Wheat	cytosol, peroxisome, plasma membrane	64.27	41.39
Os06t0607700-01	Rice	plasma membrane	62.7	40.55
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	22.02	33.79
HORVU7Hr1G090350.4	Barley	cytosol, nucleus, plasma membrane	49.66	30.19
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	36.85	26.75
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	37.75	26.67
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	38.2	26.32
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	36.85	26.11
GSMUA_Achr1P19280_001	Banana	plasma membrane	61.12	25.59
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	37.53	25.5
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	38.65	25.48
Solyc01g006720.2.1	Tomato	plastid	40.9	25.14
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	37.53	23.13
Solyc11g018690.1.1	Tomato	cytosol	12.58	16.37
Solyc07g053300.1.1	Tomato	cytosol	20.9	15.3
Solyc03g007690.1.1	Tomato	plastid	20.22	15.08
Solyc04g010210.1.1	Tomato	extracellular	22.92	14.29
Solyc05g054890.2.1	Tomato	cytosol	24.04	14.27
Solyc05g008350.2.1	Tomato	nucleus, plastid	22.7	14.23
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	19.78	14.17
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	22.47	13.93
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	19.1	13.84
Solyc09g005970.1.1	Tomato	plasma membrane	22.47	13.55
Solyc03g113690.1.1	Tomato	plastid	18.65	12.61
Solyc09g098410.1.1	Tomato	nucleus	19.78	12.07
Solyc01g097430.2.1	Tomato	cytosol, nucleus	21.57	11.46

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:ABC_2_trans	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150
GO:GO:0009555	GO:GO:0009653	GO:GO:0009987	GO:GO:0010152	GO:GO:0010584	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0042626	GO:GO:0055085	UniProt:K4CHQ5
InterPro:P-loop_NTPase	PFAM:PF01061	PANTHER:PTHR19241	PANTHER:PTHR19241:SF155	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc07g065780.1
EnsemblPlants:Solyc07g065780.1.1	TMHMM:TMhelix	UniParc:UPI000276AE80	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:67411057..67413604

Molecular Weight (calculated)

51852.1 Da

IEP (calculated)

9.642

GRAVY (calculated)

0.117

Length

445 amino acids

Sequence
(BLAST)

001: MSSYKNRWRT CKRCFWWRKK KSLDSTSANR LLQVLQGLAK MGKTIITTIH QPSSRIFHMF EKILLIAEGY PVYYGKARDS MEYFSSLGFI PEIAMNPAEF
101: LLDLATGQVN DIIVPDDLYP PQVTNEREKI VIRYLQHKYK VLLEPKENHQ LSKAPEHLQM AVKVRKDWTI SWWEQFRVLS KRTYRERCRD YFDKLRLVQS
201: VGVALLLGLL WWKSSTATEA QLRDQIGLMF YICIFWTSSS IFGAVYVFPF EKMYLVKERK ADMYRLSVYY VCSTLCDMVA HILYPTFFMC IVYFMAGFKR
301: TVQCFFLTLA ATLLIAITSQ GAGELFGAAV MSIRRAGMVA SLILMLFLLT GGYYVQHIPK FMRWLKYLSF MYYGFRLLLK VQYSGDDLYN CESKEGCRTL
401: QSSPSFDTVG LDGGLKEVWV LLAMAIVYRF LAYICLSRKI NSCNL

Best Arabidopsis Sequence Match ( AT3G13220.1 )
(BLAST)

001: MEIRRSTEEV EENHVMQITG SNGIVHNMEF MPQAYLRNQY SSEIDIDEEF VSTYPLEDAP LPIFLKFEDV EYKVRNSHAS SANLVKTMVS KVVTHTNPDP
101: DGYKHILKGI TGSTGPGEIL ALMGPSGSGK TTLLKIMGGR LTDNVKGKLT YNDIPYSPSV KRRIGFVTQD DVLLPQLTVE ETLAFAAFLR LPSSMSKEQK
201: YAKIEMIIKE LGLERCRRTR VGGGFVKGIS GGERKRASIA YEILVDPSLL LLDEPTSGLD STSATKLLHI LQGVAKAGRT VITTIHQPSS RMFHMFDKLL
301: LISEGHPAFY GKARESMEYF SSLRILPEIA MNPAEFLLDL ATGQVSDISL PDELLAAKTA QPDSEEVLLK YLKQRYKTDL EPKEKEENHR NRKAPEHLQI
401: AIQVKKDWTL SWWDQFLILS RRTFRERRRD YFDKLRLVQS LGVAVVLGLL WWKSKTDTEA HLRDQVGLMF YICIFWTSSS LFGAVYVFPF EKIYLVKERK
501: AEMYRLSVYY VCSTLCDMVA HVLYPTFFMI IVYFMAEFNR NIPCFLFTVL TILLIAITSQ GAGEFLGASV LSIKRAGMIA SLVLMLFLLT GGYYVQHIPK
601: FMQWLKYLSF MHYGFRLLLK VQYSADQLFE CGSKGGCRTL QSSSSFDTIN LNGGLQELWV LLAMAFGYRL CAYFCLRKKI SICHL

Arabidopsis Description

ABCG26ABC transporter G family member 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK50]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.