Factsheet for Solyc11g018680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 3
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36671	Canola	plasma membrane	64.14	53.76
CDX96365	Canola	plasma membrane	64.14	48.19
PGSC0003DMT400002293	Potato	cytosol, peroxisome, plasma membrane	98.97	47.6
Os11t0177400-01	Rice	plasma membrane	54.48	33.4
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	75.52	32.98
KRH34992	Soybean	cytosol, plasma membrane, plastid	72.41	31.39
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	72.41	31.34
CDX68292	Canola	cytosol, peroxisome, plasma membrane	64.48	28.77
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.48	28.77
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	63.79	28.68
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.48	28.29
Bra007999.1-P	Field mustard	plasma membrane	64.14	28.22
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	63.45	27.79
CDX72849	Canola	cytosol, peroxisome, plasma membrane	64.48	27.42
CDY03668	Canola	plasma membrane	64.14	27.11
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	63.79	27.05
GSMUA_Achr11P...	Banana	plasma membrane	55.17	26.4
TraesCS4B01G095200.1	Wheat	plastid	55.86	25.16
TraesCS4A01G216900.1	Wheat	plasma membrane, plastid	55.52	24.88
TraesCS4D01G092000.1	Wheat	plasma membrane	55.52	24.85
Zm00001d053049_P001	Maize	plasma membrane	54.48	24.84
HORVU4Hr1G018800.7	Barley	plastid	54.83	24.77
Zm00001d004762_P001	Maize	plasma membrane	53.45	24.53
KXG27901	Sorghum	plasma membrane, plastid	54.83	24.5
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	55.17	23.6
Solyc07g065780.1.1	Tomato	mitochondrion	33.79	22.02
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	45.17	21.37
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	46.55	20.9
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	44.83	20.63
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	46.55	20.61
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	47.93	20.59
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	44.48	20.54
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	42.76	17.17
Solyc01g006720.2.1	Tomato	plastid	40.69	16.3
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.79	11.24
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.1	10.79
Solyc05g008350.2.1	Tomato	nucleus, plastid	25.17	10.28
Solyc07g053300.1.1	Tomato	cytosol	20.69	9.87
Solyc03g113690.1.1	Tomato	plastid	22.07	9.73
Solyc09g005970.1.1	Tomato	plasma membrane	23.45	9.21
Solyc03g007690.1.1	Tomato	plastid	18.62	9.05
Solyc04g010210.1.1	Tomato	extracellular	22.07	8.96
Solyc09g098410.1.1	Tomato	nucleus	21.72	8.64
Solyc05g054890.2.1	Tomato	cytosol	22.07	8.53
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	20.0	8.08
Solyc01g097430.2.1	Tomato	cytosol, nucleus	21.72	7.52
CDY36670	Canola	cytosol	4.14	3.31
CDX96366	Canola	cytosol	4.14	3.25
Solyc11g018690.1.1	Tomato	cytosol	1.72	1.46

Protein Annotations

MapMan:35.1	InterPro:ABC_2_trans	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0042626	GO:GO:0055085	UniProt:K4D6S2	PFAM:PF01061	PANTHER:PTHR19241
PANTHER:PTHR19241:SF225	EnsemblPlantsGene:Solyc11g018680.1	EnsemblPlants:Solyc11g018680.1.1	TMHMM:TMhelix	UniParc:UPI000276AA72	SEG:seg

Description

No Description!

Coordinates

chr11:-:8955424..8956296

Molecular Weight (calculated)

32942.0 Da

IEP (calculated)

9.689

GRAVY (calculated)

0.510

Length

290 amino acids

Sequence
(BLAST)

001: MNKGTYTCAS SKRSCISNWF NQFSILLQRG LKERRHETFN YLRVFQVIAA SLLAGSMWWH SDYRDIQDRL GLLFFISIFW GVFPSFNAVF AFPQERAIFM
101: KERASGMYTL SSYFMARIVG DLPMDLILPT LFLTITYWMA GLKPQLLAFL LTLLVLLSYV IVSQGLGLAL GAIIMDAKQA STVITVTMLA FVLTGGFYVH
201: KVPACLAWIK YISTTFYSYR LLIDVQFGEG KEISDLLGCS RIQGSDRANC KFIEQDIIGQ IHPSMSLGIL LIMFVGYRLI AYLALRRIRA

Best Arabidopsis Sequence Match ( AT1G31770.1 )
(BLAST)

001: MPQNCIAPRP EEDGGVMVQG LPDMSDTQSK SVLAFPTITS QPGLQMSMYP ITLKFEEVVY KVKIEQTSQC MGSWKSKEKT ILNGITGMVC PGEFLAMLGP
101: SGSGKTTLLS ALGGRLSKTF SGKVMYNGQP FSGCIKRRTG FVAQDDVLYP HLTVWETLFF TALLRLPSSL TRDEKAEHVD RVIAELGLNR CTNSMIGGPL
201: FRGISGGEKK RVSIGQEMLI NPSLLLLDEP TSGLDSTTAH RIVTTIKRLA SGGRTVVTTI HQPSSRIYHM FDKVVLLSEG SPIYYGAASS AVEYFSSLGF
301: STSLTVNPAD LLLDLANGIP PDTQKETSEQ EQKTVKETLV SAYEKNISTK LKAELCNAES HSYEYTKAAA KNLKSEQWCT TWWYQFTVLL QRGVRERRFE
401: SFNKLRIFQV ISVAFLGGLL WWHTPKSHIQ DRTALLFFFS VFWGFYPLYN AVFTFPQEKR MLIKERSSGM YRLSSYFMAR NVGDLPLELA LPTAFVFIIY
501: WMGGLKPDPT TFILSLLVVL YSVLVAQGLG LAFGALLMNI KQATTLASVT TLVFLIAGGY YVQQIPPFIV WLKYLSYSYY CYKLLLGIQY TDDDYYECSK
601: GVWCRVGDFP AIKSMGLNNL WIDVFVMGVM LVGYRLMAYM ALHRVKLR

Arabidopsis Description

ABCG14ABC transporter G family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.