Factsheet for Bra016095.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96366	Canola	cytosol	51.59	92.41
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	87.75	89.23
Bra007999.1-P	Field mustard	plasma membrane	87.59	87.86
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	87.14	87.01
PGSC0003DMT400002293	Potato	cytosol, peroxisome, plasma membrane	59.61	65.34
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	28.29	64.48
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	63.54	62.69
KRH34992	Soybean	cytosol, plasma membrane, plastid	63.09	62.33
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.18	61.9
Solyc11g018690.1.1	Tomato	cytosol	31.92	61.7
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	56.43	57.83
GSMUA_Achr11P...	Banana	plasma membrane	52.95	57.76
Os11t0177400-01	Rice	plasma membrane	41.0	57.29
Zm00001d004762_P001	Maize	plasma membrane	51.89	54.27
Zm00001d053049_P001	Maize	plasma membrane	52.19	54.25
TraesCS4D01G092000.1	Wheat	plasma membrane	51.74	52.78
KXG27901	Sorghum	plasma membrane, plastid	51.59	52.54
TraesCS4B01G095200.1	Wheat	plastid	51.13	52.48
TraesCS4A01G216900.1	Wheat	plasma membrane, plastid	51.29	52.4
HORVU4Hr1G018800.7	Barley	plastid	50.68	52.18
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	52.5	51.18
Bra019051.1-P	Field mustard	plasma membrane	46.75	48.51
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	46.6	48.05
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.29	47.96
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.05	46.56
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	45.99	41.82
Bra025152.1-P	Field mustard	plastid	30.41	40.61
Bra009203.1-P	Field mustard	plasma membrane	42.51	37.22
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.21	37.1
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.52	36.42
Bra005051.1-P	Field mustard	plastid	26.93	28.99
Bra002234.1-P	Field mustard	cytosol	19.82	27.29
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.02	27.22
Bra022614.1-P	Field mustard	plastid	24.21	27.16
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.9	26.87
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	29.5	26.86
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.14	26.61
Bra013916.1-P	Field mustard	plastid	23.0	26.53
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.14	26.31
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	29.2	25.94
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.38	25.57
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.44	25.34
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.93	25.07
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.93	24.9
Bra033441.1-P	Field mustard	plastid	41.6	24.29
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.78	24.02
Bra014774.1-P	Field mustard	plasma membrane	21.79	22.75
Bra005049.1-P	Field mustard	plasma membrane	10.14	22.56
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.74	20.08
Bra014776.1-P	Field mustard	cytosol	29.8	15.34

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	EnsemblPlantsGene:Bra016095
EnsemblPlants:Bra016095.1	EnsemblPlants:Bra016095.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	UniProt:M4DHW8	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF225	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002541B64
SEG:seg	:	:	:	:	:

Description

AT1G71960 (E=1e-312) | ABC transporter family protein

Coordinates

chrA07:-:19432991..19438446

Molecular Weight (calculated)

72219.5 Da

IEP (calculated)

8.942

GRAVY (calculated)

0.249

Length

661 amino acids

Sequence
(BLAST)

001: MSGFDGVENQ MNGPDSSPRL PQDTCDQPSS LFSSSPCFPI TLKFVDVCYR VKIQGKSSDS VKLKRLLGLE HKPSDEIPST ERTILSGVTG MVTPGEFMAV
101: LGPSGSGKST LLNAVAGRLH GTGLTGKILA NDSKLTKQTL KRTGFVAQDD LLYPHLTVRE TLVFVALLRL PRSLARDDKI KAAESVISEL GLEKCENTVV
201: GNTFIRGISG GERKRVSIAH ELLINPSLLV LDEPTSGLDA TAALRLVQTL AGLAHGKGKT VVTSIHQPSS RVFQMFDTVL LLSEGKCLFV GKGRDAMAYF
301: DSVGFSPAFP MNPADFLLDL ANGVCQIDGT TEREKPDVRQ TLAIAYDTLL APNVKACIDA SPSPAENARF VKTRKNARGI MSGLATWFSQ LCILLHRLIK
401: ERRHESFDAL RVFQVLAASL LCSLMWWHSD YRDVHDRLGL LFFISIFWGV LPSFNAVFTF PQERAIFTRE RASGMYTLSS YFMAHVIGSL SMELVLPAAF
501: LTLTYWMVGL RPGLVPFLLT LSVLLLYVLA SQGLGLALGA AIMDAKKAST IVTVTMLAFV LTGGYYVNKV PSGMVWMKYV STTFYCYRLL IAVQYGNGDA
601: ILAMVGCEPK GTQGAAKAAG CRFMEEEVIG DIGLWTSVSV LFFMFVGYRV LAYLALRRIK L

Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)

001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH

Arabidopsis Description

ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.