Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016095.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 87.01 | 87.14 |
| Bra007999.1-P | Field mustard | plasma membrane | 85.05 | 85.43 |
| Bra003903.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 83.69 | 85.23 |
| CDX68292 | Canola | cytosol, peroxisome, plasma membrane | 83.53 | 85.08 |
| CDX72849 | Canola | cytosol, peroxisome, plasma membrane | 87.01 | 84.46 |
| CDX96366 | Canola | cytosol | 46.22 | 82.93 |
| CDX82199 | Canola | cytosol, peroxisome, plasma membrane, plastid | 85.2 | 82.46 |
| CDY03668 | Canola | plasma membrane | 85.05 | 82.07 |
| CDY36671 | Canola | plasma membrane | 42.6 | 81.5 |
| CDY36670 | Canola | cytosol | 44.41 | 80.99 |
| CDX96365 | Canola | plasma membrane | 45.62 | 78.24 |
| PGSC0003DMT400002293 | Potato | cytosol, peroxisome, plasma membrane | 59.37 | 65.17 |
| Solyc11g018680.1.1 | Tomato | golgi, mitochondrion, plasma membrane, plastid | 27.79 | 63.45 |
| KRG91794 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 61.93 | 61.19 |
| Solyc11g018690.1.1 | Tomato | cytosol | 31.57 | 61.11 |
| KRH34992 | Soybean | cytosol, plasma membrane, plastid | 61.63 | 60.99 |
| VIT_18s0072g01220.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 60.88 | 60.69 |
| GSMUA_Achr11P... | Banana | plasma membrane | 53.32 | 58.25 |
| GSMUA_Achr6P25480_001 | Banana | cytosol, peroxisome, plastid | 56.65 | 58.14 |
| Os11t0177400-01 | Rice | plasma membrane | 40.63 | 56.87 |
| Zm00001d004762_P001 | Maize | plasma membrane | 51.36 | 53.8 |
| Zm00001d053049_P001 | Maize | plasma membrane | 51.51 | 53.62 |
| KXG27901 | Sorghum | plasma membrane, plastid | 51.36 | 52.39 |
| HORVU4Hr1G018800.7 | Barley | plastid | 50.76 | 52.34 |
| TraesCS4A01G216900.1 | Wheat | plasma membrane, plastid | 51.06 | 52.24 |
| TraesCS4D01G092000.1 | Wheat | plasma membrane | 51.06 | 52.16 |
| TraesCS4B01G095200.1 | Wheat | plastid | 50.45 | 51.86 |
| GSMUA_Achr9P08630_001 | Banana | cytosol, peroxisome, plasma membrane | 52.27 | 51.03 |
| AT1G31770.1 | Thale cress | cytosol, nucleus, peroxisome | 46.07 | 47.07 |
| AT4G27420.1 | Thale cress | cytosol, peroxisome, plasma membrane | 45.02 | 46.71 |
| AT3G25620.2 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 46.37 | 45.68 |
| AT5G06530.1 | Thale cress | plasma membrane | 42.15 | 37.15 |
| AT3G13220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 38.07 | 36.79 |
| AT3G55100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 28.1 | 28.1 |
| AT5G19410.2 | Thale cress | plastid | 26.13 | 27.33 |
| AT5G13580.1 | Thale cress | cytosol, peroxisome, plasma membrane | 29.61 | 26.96 |
| AT2G13610.1 | Thale cress | cytosol, peroxisome, plasma membrane | 26.28 | 26.81 |
| AT1G53270.1 | Thale cress | plasma membrane | 23.57 | 26.44 |
| AT4G25750.1 | Thale cress | plasma membrane | 22.81 | 26.17 |
| AT3G55130.1 | Thale cress | mitochondrion, peroxisome, plasma membrane | 28.55 | 26.07 |
| AT3G55110.1 | Thale cress | cytosol, peroxisome, plasma membrane | 27.79 | 25.99 |
| AT2G39350.1 | Thale cress | cytosol | 28.85 | 25.81 |
| AT5G52860.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 22.96 | 25.81 |
| AT3G55090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 28.25 | 25.41 |
| AT3G53510.1 | Thale cress | plasma membrane | 27.79 | 24.9 |
| AT2G37360.1 | Thale cress | cytosol, peroxisome, plasma membrane | 27.95 | 24.5 |
| AT2G01320.3 | Thale cress | peroxisome, plastid, vacuole | 26.89 | 24.45 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:843527 | InterPro:AAA+_ATPase | ProteinID:AAG52231.1 | Symbol:ABCG25 |
| InterPro:ABC_2_trans | InterPro:ABC_transporter-like | ProteinID:AEE35258.1 | ArrayExpress:AT1G71960 | EnsemblPlantsGene:AT1G71960 | RefSeq:AT1G71960 |
| TAIR:AT1G71960 | RefSeq:AT1G71960-TAIR-G | EnsemblPlants:AT1G71960.1 | TAIR:AT1G71960.1 | EMBL:AY050810 | Unigene:At.18064 |
| EMBL:BT005795 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009737 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | GO:GO:0080168 | InterPro:IPR003439 | RefSeq:NP_565030.1 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF01061 | PO:PO:0000013 | PO:PO:0000036 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50893 |
| PANTHER:PTHR19241 | PANTHER:PTHR19241:SF225 | UniProt:Q84TH5 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| UniParc:UPI000000C744 | SEG:seg | : | : | : | : |
Description
ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
Coordinates
chr1:-:27082394..27088248
Molecular Weight (calculated)
72907.4 Da
IEP (calculated)
9.166
GRAVY (calculated)
0.222
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.