Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73549 | Canola | cytosol, peroxisome, plasma membrane | 87.01 | 85.05 |
| AT2G37360.1 | Thale cress | cytosol, peroxisome, plasma membrane | 82.54 | 80.79 |
| KRH67592 | Soybean | plastid | 72.8 | 73.3 |
| VIT_08s0040g02840.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 72.8 | 73.1 |
| KRG95875 | Soybean | cytosol, peroxisome, plasma membrane | 72.67 | 72.96 |
| AT5G13580.1 | Thale cress | cytosol, peroxisome, plasma membrane | 68.06 | 69.19 |
| Solyc09g005970.1.1 | Tomato | plasma membrane | 68.88 | 68.97 |
| PGSC0003DMT400061466 | Potato | plasma membrane | 69.15 | 68.96 |
| Bra007006.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 87.14 | 68.08 |
| AT3G55090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 64.95 | 65.22 |
| AT2G39350.1 | Thale cress | cytosol | 65.09 | 65.0 |
| GSMUA_Achr8P02140_001 | Banana | cytosol, peroxisome, plasma membrane | 61.84 | 64.73 |
| GSMUA_Achr5P28450_001 | Banana | plasma membrane | 60.08 | 63.61 |
| AT3G55100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 54.8 | 61.18 |
| Zm00001d012438_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 61.43 | 61.1 |
| Os05t0120200-01 | Rice | plasma membrane | 57.78 | 61.09 |
| HORVU5Hr1G021120.1 | Barley | cytosol, peroxisome, plasma membrane | 56.29 | 61.09 |
| TraesCS5D01G093600.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 56.16 | 60.94 |
| EES01718 | Sorghum | cytosol, peroxisome, plasma membrane, plastid | 61.43 | 60.94 |
| TraesCS5A01G078500.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 56.02 | 60.79 |
| HORVU3Hr1G087130.1 | Barley | plasma membrane, plastid | 62.11 | 60.63 |
| HORVU0Hr1G007130.1 | Barley | plasma membrane, plastid | 62.11 | 60.63 |
| TraesCS3B01G387500.1 | Wheat | plastid | 61.84 | 60.37 |
| TraesCS5B01G087400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 55.62 | 60.35 |
| TraesCS3D01G348400.1 | Wheat | plasma membrane, plastid | 61.7 | 60.32 |
| TraesCS3A01G354500.1 | Wheat | plasma membrane, plastid | 61.7 | 60.32 |
| Os05t0120000-00 | Rice | plasma membrane | 55.35 | 60.15 |
| Zm00001d028689_P001 | Maize | cytosol, peroxisome, plasma membrane | 64.14 | 60.0 |
| TraesCS4B01G200600.1 | Wheat | cytosol, peroxisome, plasma membrane | 64.14 | 59.85 |
| EES18923 | Sorghum | cytosol, peroxisome, plasma membrane | 57.78 | 59.8 |
| HORVU3Hr1G007180.1 | Barley | cytosol, peroxisome, plasma membrane | 53.99 | 59.73 |
| TraesCS4A01G103400.1 | Wheat | cytosol, peroxisome, plasma membrane | 64.28 | 59.67 |
| AT3G55110.1 | Thale cress | cytosol, peroxisome, plasma membrane | 57.1 | 59.6 |
| EER95064 | Sorghum | cytosol, peroxisome, plasma membrane | 64.14 | 59.55 |
| Os01t0836600-01 | Rice | plasma membrane | 60.08 | 59.28 |
| Zm00001d042953_P001 | Maize | plasma membrane | 61.03 | 59.26 |
| TraesCS1B01G066000.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.48 | 59.08 |
| TraesCS1D01G052000.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.21 | 58.96 |
| Zm00001d035553_P001 | Maize | plasma membrane | 56.83 | 58.82 |
| Zm00001d011006_P001 | Maize | cytosol, peroxisome, vacuole | 56.56 | 58.71 |
| EES17614 | Sorghum | cytosol, peroxisome, vacuole | 56.29 | 58.59 |
| Os03t0281900-01 | Rice | cytosol, plasma membrane | 62.38 | 58.58 |
| TraesCS3B01G047600.1 | Wheat | cytosol, peroxisome, vacuole | 53.32 | 58.37 |
| TraesCS1A01G049600.2 | Wheat | cytosol, peroxisome, plasma membrane | 55.21 | 58.29 |
| TraesCS3A01G036400.1 | Wheat | cytosol, peroxisome, vacuole | 53.04 | 58.07 |
| AT3G55130.1 | Thale cress | mitochondrion, peroxisome, plasma membrane | 55.48 | 56.55 |
| TraesCS4D01G201700.1 | Wheat | mitochondrion, plasma membrane, plastid | 64.01 | 56.24 |
| HORVU1Hr1G009920.2 | Barley | plasma membrane, plastid | 55.35 | 51.84 |
| GSMUA_Achr6P33280_001 | Banana | cytosol, peroxisome, plasma membrane | 61.7 | 50.72 |
| HORVU4Hr1G058070.2 | Barley | cytosol | 49.26 | 44.66 |
| HORVU4Hr1G058160.2 | Barley | cytosol, peroxisome | 38.84 | 43.75 |
| HORVU5Hr1G021110.1 | Barley | cytosol | 25.03 | 43.12 |
| Os03t0282100-00 | Rice | cytosol, nucleus, plastid | 37.75 | 36.42 |
| AT1G53270.1 | Thale cress | plasma membrane | 28.69 | 35.93 |
| GSMUA_Achr6P08820_001 | Banana | plasma membrane | 56.16 | 33.58 |
| AT4G25750.1 | Thale cress | plasma membrane | 25.98 | 33.28 |
| AT5G52860.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 26.25 | 32.94 |
| AT5G19410.2 | Thale cress | plastid | 28.15 | 32.86 |
| AT2G13610.1 | Thale cress | cytosol, peroxisome, plasma membrane | 28.82 | 32.82 |
| AT1G71960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 24.9 | 27.79 |
| AT4G27420.1 | Thale cress | cytosol, peroxisome, plasma membrane | 23.82 | 27.59 |
| AT3G25620.2 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 25.03 | 27.53 |
| AT1G31770.1 | Thale cress | cytosol, nucleus, peroxisome | 23.68 | 27.01 |
| AT3G13220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 24.22 | 26.13 |
| AT5G06530.1 | Thale cress | plasma membrane | 26.52 | 26.1 |
| AT2G01320.3 | Thale cress | peroxisome, plastid, vacuole | 24.09 | 24.45 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:824519 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | ProteinID:AEE79099.1 | EMBL:AK228064 | ArrayExpress:AT3G53510 | EnsemblPlantsGene:AT3G53510 | RefSeq:AT3G53510 |
| TAIR:AT3G53510 | RefSeq:AT3G53510-TAIR-G | EnsemblPlants:AT3G53510.1 | TAIR:AT3G53510.1 | Unigene:At.35188 | ProteinID:CAB67658.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010345 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0019748 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | RefSeq:NP_190919.1 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009030 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF428 | UniProt:Q9LFG8 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI00000A86EE |
| SEG:seg | : | : | : | : | : |
Description
ABCG20ABC transporter G family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFG8]
Coordinates
chr3:-:19837148..19839983
Molecular Weight (calculated)
82093.6 Da
IEP (calculated)
9.464
GRAVY (calculated)
0.129
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGLFGILSP AKRVNGDGLP LFYNIHKSVE LQRCHRDTAR VSVTLAELLM SVEDEGDDQS RAMDIAVASN FWSSVPSSRV PSSSPFVLSF KDLTYSVKIK
101: KKFKPFPCCG NSPFDGNDME MNTKVLLNGI SGEAREGEMM AVLGASGSGK STLIDALANR ISKESLRGDI TLNGEVLESS LHKVISAYVM QDDLLFPMLT
201: VEETLMFSAE FRLPSSLSKK KKKARVQALI DQLGLRNAAK TVIGDEGHRG VSGGERRRVS IGTDIIHDPI ILFLDEPTSG LDSTSAYMVV KVLQRIAQSG
301: SIVIMSIHQP SYRILGLLDK LIFLSRGNTV YSGSPTHLPQ FFSEFGHPIP ENENKPEFAL DLIRELEDSP EGTKSLVEFH KQWRAKQTSS QSRRNTNVSL
401: KDAISASISR GKLVSGATNL RSSFQTFANP FWTEMLVIGK RSILNSRRQP ELFGIRLGAV LVTGMILATI FWKLDNSPRG IQERLGFFAF AMSTTFYTCA
501: EAIPVFLQER YIFMRETAYN AYRRSSYVLA HTIISIPALI ILSAAFAAST FSAVGLAGGS EGFLFFFFTI LTAFWAGSSF VTFLSGVVSH VMIGFTVVVA
601: ILAYFLLFSG FFISRDRIPL YWIWFHYLSL VKYPYEGVLQ NEFEDPTKCF VRGIQMFDNS PLGQVPTAVK ISLLKSMSGV LGINVTAETC VTTGIDILKQ
701: QGITEISKWN CLWITVAWGF FFRVLFYFTL LIGSKNKRR
101: KKFKPFPCCG NSPFDGNDME MNTKVLLNGI SGEAREGEMM AVLGASGSGK STLIDALANR ISKESLRGDI TLNGEVLESS LHKVISAYVM QDDLLFPMLT
201: VEETLMFSAE FRLPSSLSKK KKKARVQALI DQLGLRNAAK TVIGDEGHRG VSGGERRRVS IGTDIIHDPI ILFLDEPTSG LDSTSAYMVV KVLQRIAQSG
301: SIVIMSIHQP SYRILGLLDK LIFLSRGNTV YSGSPTHLPQ FFSEFGHPIP ENENKPEFAL DLIRELEDSP EGTKSLVEFH KQWRAKQTSS QSRRNTNVSL
401: KDAISASISR GKLVSGATNL RSSFQTFANP FWTEMLVIGK RSILNSRRQP ELFGIRLGAV LVTGMILATI FWKLDNSPRG IQERLGFFAF AMSTTFYTCA
501: EAIPVFLQER YIFMRETAYN AYRRSSYVLA HTIISIPALI ILSAAFAAST FSAVGLAGGS EGFLFFFFTI LTAFWAGSSF VTFLSGVVSH VMIGFTVVVA
601: ILAYFLLFSG FFISRDRIPL YWIWFHYLSL VKYPYEGVLQ NEFEDPTKCF VRGIQMFDNS PLGQVPTAVK ISLLKSMSGV LGINVTAETC VTTGIDILKQ
701: QGITEISKWN CLWITVAWGF FFRVLFYFTL LIGSKNKRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.