Factsheet for AT3G55100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	71.0	66.38
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	70.09	64.0
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	65.71	59.83
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	64.2	57.74
AT2G39350.1	Thale cress	cytosol	64.2	57.43
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.7	56.09
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.55	55.95
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.55	55.95
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	56.65	55.07
AT3G53510.1	Thale cress	plasma membrane	61.18	54.8
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	55.29	54.79
Os05t0120000-00	Rice	plasma membrane	55.74	54.26
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	56.5	54.05
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	56.65	54.03
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	57.55	53.97
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	54.98	53.93
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	54.98	53.93
Os05t0120200-01	Rice	plasma membrane	56.8	53.79
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	61.33	53.77
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	56.8	53.71
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	57.7	53.5
GSMUA_Achr5P28450_001	Banana	plasma membrane	56.34	53.44
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	56.95	52.95
Zm00001d035553_P001	Maize	plasma membrane	56.95	52.8
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	59.21	52.76
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	59.97	52.44
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	59.97	52.44
EES17614	Sorghum	cytosol, peroxisome, vacuole	56.19	52.39
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	58.91	52.35
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	59.67	52.25
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	59.67	52.25
TraesCS3B01G387500.1	Wheat	plastid	59.67	52.18
Os01t0836600-01	Rice	plasma membrane	58.91	52.07
Zm00001d042953_P001	Maize	plasma membrane	58.76	51.12
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	60.73	50.89
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	60.73	50.5
Os03t0281900-01	Rice	cytosol, plasma membrane	59.06	49.68
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	59.21	49.49
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	59.21	49.25
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	56.5	47.4
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	59.21	46.61
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	56.8	41.82
HORVU5Hr1G021110.1	Barley	cytosol	24.92	38.46
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	37.92	38.26
HORVU4Hr1G058070.2	Barley	cytosol	45.17	36.69
AT1G53270.1	Thale cress	plasma membrane	30.51	34.24
AT4G25750.1	Thale cress	plasma membrane	29.31	33.62
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	29.46	33.11
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	31.57	32.2
Os03t0282100-00	Rice	cytosol, nucleus, plastid	36.4	31.46
AT5G19410.2	Thale cress	plastid	29.15	30.49
GSMUA_Achr6P08820_001	Banana	plasma membrane	53.32	28.56
AT1G71960.1	Thale cress	cytosol, peroxisome, plasma membrane	28.1	28.1
AT1G31770.1	Thale cress	cytosol, nucleus, peroxisome	27.34	27.93
AT4G27420.1	Thale cress	cytosol, peroxisome, plasma membrane	26.89	27.9
AT3G25620.2	Thale cress	cytosol, nucleus, plasma membrane, plastid	27.95	27.53
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	26.28	25.4
AT5G06530.1	Thale cress	plasma membrane	27.64	24.37
AT2G01320.3	Thale cress	peroxisome, plastid, vacuole	25.53	23.21

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:824676	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:AEE79340.1	ProteinID:ANM63739.1	ArrayExpress:AT3G55100	EnsemblPlantsGene:AT3G55100	RefSeq:AT3G55100
TAIR:AT3G55100	RefSeq:AT3G55100-TAIR-G	EnsemblPlants:AT3G55100.1	TAIR:AT3G55100.1	Unigene:At.66470	ProteinID:CAB82705.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
RefSeq:NP_001319754.1	RefSeq:NP_191070.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PO:PO:0007611
PO:PO:0007616	PO:PO:0009032	PO:PO:0009046	PO:PO:0025022	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	UniProt:Q9M2V6	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI00000A09C3	SEG:seg	:	:	:	:

Description

ABCG17ABC transporter G family member 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V6]

Coordinates

chr3:-:20420279..20423114

Molecular Weight (calculated)

74387.2 Da

IEP (calculated)

7.202

GRAVY (calculated)

0.153

Length

662 amino acids

Sequence
(BLAST)

001: MLQRDAVIDV DESEIPPIPF VLAFNDLTYN VTLQQRFGLR FGHSPAKIKT LLNGITGEAK EGEILAILGA SGAGKSTLID ALAGQIAEGS LKGTVTLNGE
101: ALQSRLLRVI SAYVMQEDLL FPMLTVEETL MFAAEFRLPR SLSKSKKRNR VETLIDQLGL TTVKNTVIGD EGHRGVSGGE RRRVSIGTDI IHDPIVLFLD
201: EPTSGLDSTS AFMVVQVLKK IARSGSIVIM SIHQPSGRIM EFLDRVIVLS SGQIVFSDSP ATLPLFFSEF GSPIPEKENI AEFTLDLIKD LEGSPEGTRG
301: LVEFNRNWQH RKLRVSQEPH HNSSSLGEAI NASISRGKLV STSYRSIPSY VNPWWVETVI LAKRYMINWT RTPELIGTRV FIVMMTGFLL ATVYWKVDDS
401: PRGVQERLSF FSFAMATMFY SCADGLPAFI QERYIFLRET AHNAYRRSSY VISHSLVTLP HLFALSIGFA ATTFWFVGLN GGLAGFIYYL MIIFASFWSG
501: CSFVTFVSGV IPNVMMSYMV TFGYLSYCLL FSGFYVNRDR IHLYWIWIHY ISLLKYPYEA VLHNEFDDPS RCFVRGNQVF DNTIMEGVSE TTKAKLLETM
601: SGYLGMELTE STCLTTGSDL LKQHGIEQLD KWGCLWVTLA WGFFFRILFY FSLLLGSKNK RA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.