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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93119 Canola cytosol, peroxisome, plasma membrane 86.9 93.22
CDX89610 Canola cytosol, peroxisome, plasma membrane 86.44 92.73
Bra013141.1-P Field mustard cytosol, peroxisome, plasma membrane 89.83 92.25
VIT_07s0031g02550.t01 Wine grape cytosol, peroxisome, plasma membrane 71.03 72.6
KRH53911 Soybean cytosol, peroxisome, plasma membrane 68.41 71.61
KRH59586 Soybean cytosol, peroxisome, plasma membrane 70.42 70.42
KRH40938 Soybean cytosol, peroxisome, plasma membrane 70.42 69.88
GSMUA_Achr8P32630_001 Banana cytosol, peroxisome, plasma membrane 55.32 69.17
KRH64027 Soybean extracellular 67.95 68.91
Solyc05g056470.1.1 Tomato cytosol, peroxisome, plasma membrane 62.71 66.29
PGSC0003DMT400059944 Potato cytosol, peroxisome, plasma membrane 65.18 65.99
GSMUA_Achr9P00310_001 Banana cytosol 50.54 63.44
Zm00001d009492_P001 Maize mitochondrion, plasma membrane 23.73 56.0
EES01897 Sorghum cytosol, plasma membrane, plastid 52.08 50.22
HORVU2Hr1G124860.3 Barley nucleus, peroxisome, plastid 42.37 49.64
TraesCS2A01G574700.1 Wheat plasma membrane 49.46 49.38
TraesCS2B01G612200.1 Wheat plasma membrane 50.85 48.89
TraesCS2D01G585300.1 Wheat plasma membrane 50.69 48.81
AT1G53270.1 Thale cress plasma membrane 43.3 47.63
Zm00001d026706_P005 Maize plasma membrane 51.0 44.13
AT4G25750.1 Thale cress plasma membrane 37.6 42.29
AT5G52860.1 Thale cress cytosol, nucleus, plasma membrane, plastid 37.75 41.6
AT5G19410.2 Thale cress plastid 37.75 38.7
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 32.2 31.57
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 34.51 30.81
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 33.13 30.37
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 34.05 30.03
AT2G39350.1 Thale cress cytosol 33.74 29.59
AT3G53510.1 Thale cress plasma membrane 32.82 28.82
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 32.05 28.69
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 32.82 28.21
AT3G25620.2 Thale cress cytosol, nucleus, plasma membrane, plastid 27.89 26.93
AT1G31770.1 Thale cress cytosol, nucleus, peroxisome 26.35 26.39
AT4G27420.1 Thale cress cytosol, peroxisome, plasma membrane 25.89 26.33
AT1G71960.1 Thale cress cytosol, peroxisome, plasma membrane 26.81 26.28
AT3G13220.1 Thale cress cytosol, peroxisome, plasma membrane 26.66 25.26
AT5G06530.1 Thale cress plasma membrane 28.35 24.5
AT2G01320.3 Thale cress peroxisome, plastid, vacuole 24.65 21.98
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:815846UniProt:A0A178VY65InterPro:AAA+_ATPaseProteinID:AAD22683.1
InterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AEC06245.1EMBL:AK220826ArrayExpress:AT2G13610
EnsemblPlantsGene:AT2G13610RefSeq:AT2G13610TAIR:AT2G13610RefSeq:AT2G13610-TAIR-GEnsemblPlants:AT2G13610.1TAIR:AT2G13610.1
EMBL:AY039972EMBL:AY133881Unigene:At.14323GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085InterPro:IPR003439RefSeq:NP_178984.1ProteinID:OAP10401.1InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF460
UniProt:Q9SIT6SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI00000A95A1:
Description
ABCG5ABC transporter G family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT6]
Coordinates
chr2:-:5673688..5675995
Molecular Weight (calculated)
73318.6 Da
IEP (calculated)
9.079
GRAVY (calculated)
0.067
Length
649 amino acids
Sequence
(BLAST)
001: MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ
101: TGSVYVNKRP VDRANFKKIS GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV RGISGGERRR VSIGVEVIHD
201: PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT
301: KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG
401: SGIVLGLIFH NLKDDLKGAR ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL AILFSTPVYW LVGLNPSFMA
501: FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE
601: DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.